Alicycliphilus denitrificans K601: Alide2_4136
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Entry
Alide2_4136 CDS
T01463
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk03030
DNA replication
adk03430
Mismatch repair
adk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alide2_4136
03430 Mismatch repair
Alide2_4136
03440 Homologous recombination
Alide2_4136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adk03032
]
Alide2_4136
03400 DNA repair and recombination proteins [BR:
adk03400
]
Alide2_4136
Enzymes [BR:
adk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alide2_4136
DNA replication proteins [BR:
adk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Alide2_4136
DNA repair and recombination proteins [BR:
adk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Alide2_4136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEB86453
UniProt:
F4G5X2
LinkDB
All DBs
Position
complement(4315621..4316286)
Genome browser
AA seq
221 aa
AA seq
DB search
MSRHYASLPPLWWERLRRWWLVYHLGEPEFAFMFDPPPPGEWVALDCETTGLNPRTDEIV
SIGAVRIVGERILTSERLELLVRPEKGVSAGSVRIHRLRERDLAGGIPRDEAMRRLMHFI
GSRPLVGYYLEFDVAMLGRAIWPLLGMGLPQRKIEVSALYYDYKFRQLPPYQQQANADID
LRFSTLMRDLQLPEREAHDALNDAVMAAMAFIKLRRLRGEV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccactatgcctccctgcccccgctgtggtgggaaaggctgcgccgctggtgg
ctggtctaccacctgggcgagcccgagttcgcgttcatgttcgacccgcccccgccgggc
gaatgggtggcgctggactgcgagaccacggggctcaacccgcgcaccgacgagatcgtc
tccatcggcgcggtgcgcatcgtgggcgagcgcatcctgaccagcgaacgcctggagctg
ctggtgcgcccggagaagggcgtgtcggccggcagcgtgcgcatccaccgcctgcgcgag
cgcgacctggccggcggcatcccgcgcgacgaggccatgcgccggctcatgcacttcatc
ggcagccgcccgctggtgggctactacctcgaattcgacgtggccatgctgggccgcgcc
atctggccgctgctgggcatgggcctgccgcagcgcaagatcgaggtctcggccctgtac
tacgactacaagttccgccagctgccgccctaccagcagcaggccaatgccgacatcgac
ctgcgcttctccacgctgatgcgcgacctgcagctgcccgagcgcgaggcgcacgacgcg
ctcaacgacgcggtgatggcggccatggccttcatcaagctgcggcgcctgcgcggcgag
gtttga
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