Alicycliphilus denitrificans K601: Alide2_4220
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Entry
Alide2_4220 CDS
T01463
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk02020
Two-component system
adk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Alide2_4220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Alide2_4220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adk03021
]
Alide2_4220
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
adk02035
]
Alide2_4220
Transcription machinery [BR:
adk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alide2_4220
Bacterial motility proteins [BR:
adk02035
]
Flagellar system
Flagellar assembly proteins
Stator
Alide2_4220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
Acetyltransf_5
CT_C_D
GerE
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AEB86535
UniProt:
F4G6S3
LinkDB
All DBs
Position
4415992..4416708
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGQLDRDALFHQHLPLVRRIAHHMIAKLPPNVELDDLVQVGMIGLTDALSRYEAAQ
GVQFETFASQRIRGAMLDELRDGDWMSRGARKSQKEIEQALHRVEQRLGRSPMESEIAAE
LGMDLADYQALLGKVRGTQLVYLEDMGGGEEGEEGFLDRHVADEGADPMAVLRDQRLRTS
LVAAIKQLPEREQHIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQAIARLRTKMRGH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagcgaaaggccagctcgaccgggacgcgctgtttcaccagcacctgcccctg
gtgcggcgcatcgcgcaccacatgatcgccaagctcccgcccaacgtggagctcgatgac
ctggtccaggtcggcatgatcggcctgaccgacgcgctctcgcgctacgaggcggcccag
ggcgtgcagttcgagaccttcgccagccagcgcatccgcggcgccatgctcgacgagctg
cgcgacggcgactggatgagccgcggcgcgcgcaagagccagaaggagatcgagcaggcc
ctgcaccgcgtggagcagcgcctgggccgcagccccatggagtccgagatagcggccgag
ctgggcatggacctggcggactaccaggccctgctgggcaaggtgcgcggcacgcagctc
gtgtacctggaggacatgggcggcggcgaggagggcgaggaaggcttcctggaccgtcac
gtggccgacgagggcgccgaccccatggccgtgctgcgcgaccagcgcctgcgcacctcg
ctggtggcggccatcaagcagctacccgagcgcgagcagcacatcatgggtatgtactac
gagcacgacatgaacctcaaggaaatcgccgccgtgctgggcgtgaccgagtcgcgcgtg
tgccagctgcacagccaggcgattgcgcggttgcggaccaagatgcggggacattaa
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