Alicycliphilus denitrificans K601: Alide2_4352
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Entry
Alide2_4352 CDS
T01463
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Alide2_4352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adk03021
]
Alide2_4352
03400 DNA repair and recombination proteins [BR:
adk03400
]
Alide2_4352
Enzymes [BR:
adk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Alide2_4352
Transcription machinery [BR:
adk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Alide2_4352
DNA repair and recombination proteins [BR:
adk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Alide2_4352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEB86658
UniProt:
F4G7R1
LinkDB
All DBs
Position
complement(4555417..4556412)
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AA seq
331 aa
AA seq
DB search
MQTNLLKPKAINVEQLGHNRAKVELEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRFADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVLEIETNGAISAEEAVRASAKILVEQLAVFAQLDGGEIFESQA
TGARAASGATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRK
SLNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcaatcaatgtcgaacaacttggccacaaccgc
gccaaggtcgaactggagcctttcgagcgtggctacggccacacgctgggcaacgccatc
cggcgtgtcctgctctcgtccatggtgggttacgcagcaaccgaggtgacgattgccggt
gtcttgcacgagtactcgtccatcgacggtgtccaggaggatgtggtcaacatcctgttg
aacctcaagggagtggtgttcaagctccataaccgcgacgaggtcacgctgagcctgcgc
aaggatggcgagggcgttgtgaccgcacgcgacatccagacgccccacgacgtcgagatc
gtcaaccccgaccacgtgattgccaccctgtctgccggtggcaagctggacatgcagatc
aaggtcgaaaagggccgcggctacgtgccgggcaatctgcgccgtttcgcggacgaatcg
accaagtcgatcggccgcatcgtgctggacgcgtccttctcgcccgtcaagcgtgtgagc
tacacggtggagagtgcccgcgtcgagcagcgcaccgatctggacaagctggtcttggag
atcgagaccaacggtgccatctcggccgaagaagccgtgcgtgcgtccgccaagatcctg
gtcgagcagctggccgtgttcgcccagctcgacggcggcgagatcttcgaaagccaggcc
acgggcgcgcgggcggccagcggcgccaccttcgacccgatcctgctgcgtcccgtggat
gagctcgaactcacggtgcgttcggccaactgtctcaaggccgagaacatctactacatc
ggcgacctcatccagcgcaccgagaacgagctgctcaagaccccgaacctggggcgcaag
tcgctcaacgaaatcaaggaagttctggcttcgcgcggtctcacgctgggcatgaagctg
gagaactggccgccggctggtctcgacaagcgttaa
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