Auricularia subglabra: AURDEDRAFT_101086
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Entry
AURDEDRAFT_101086 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_101086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_101086
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_101086
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURDEDRAFT_101086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-ProteinID:
EJD48992
JGI:
101086
LinkDB
All DBs
AA seq
538 aa
AA seq
DB search
MNRPGQAPQRPPNLAPTPAMSAQFRAPYQQYAMPQRSVMQQYPPLTSHRAQNIGGQPSVA
SAVGGAQAGREFDPSDFPALGAPNQPSQPTAQESHQSALNGFQQQSQDQQHRQNVLGSLA
GAQQQQQAQQQLQQQQQQQQAGLMTIGQQQQRLQQAFASDADKRSYAVKLNQANSAAWNS
ANPSQSQQGFHQNLANGVPAQHHLHQQPNSSSLNAPPGLPPGLQSFSQPQQHIQQQSTQH
AIGGGLQHGQYVGAGAIPNASDPHASPTQQHGAVQQGGVNQQGGLPQTPAQQILISPADR
WGLMGLLALIKTTDPDVNLLSYGQDLGTMGMDMNAQGHISGSFITPWSDSSAAHTVEPDF
HLPPCYNIHAAPPGPSKAAAFSDETLFFMFYSSPRDQLQEIAAQELYNRAWRFHKESRLW
IIKESGASPSQKIPGGEVGVYQYFDPDNWERQRKQMQVLYSDLEERTPNVPAFAGNMPHQ
LQQQQQQSFQQGPGQAQAGQNAQLALQGAPAQALHMQLQAQNAQRGFGSMGMAGVAAM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccccggacaagcaccccagcggcctcccaatcttgcacccacgccagccatg
tcggcccagtttcgcgccccgtaccagcaatacgcgatgccacagcgcagcgtcatgcag
caatatcctccgctgaccagccaccgcgcgcaaaatatcgggggccagccgtctgtcgcc
agcgccgtcggcggggcgcaggccggacgagaattcgacccgagcgacttcccagcgctc
ggcgcccccaaccagccgtcccagccgaccgcgcaggagagccaccagagcgcgttgaac
ggcttccagcagcagtcgcaggatcagcagcatcgacagaacgtcctcggctccctcgca
ggcgcacagcagcagcaacaggcacaacagcagctgcagcaacagcagcaacagcagcag
gccggtcttatgaccataggccagcagcagcagcggttgcagcaggccttcgcgtctgac
gcggacaaacggagttacgcggtcaagctcaaccaggcaaacagcgcggcatggaattcg
gcaaatccttctcagagtcaacagggctttcaccaaaacctcgcaaacggcgtgcccgca
caacaccatctacaccagcaacccaactcctcgtccttgaacgcacccccaggactcccg
ccaggcctacagtccttcagccagccgcagcaacacatacagcagcagtcgacacagcat
gcgatcggtggtggtcttcagcacggacaatacgttggtgcaggcgcaataccaaacgca
tctgacccgcacgcaagtcccacgcaacaacacggcgcagtgcagcagggcggcgtgaac
cagcagggtggccttccccagacgcctgctcagcagatcctcatctcccccgctgaccgc
tgggggctcatgggtctccttgcgctcattaagacgactgatcccgacgttaacctgctg
tcatacggccaggaccttggcacgatgggcatggacatgaatgcgcaagggcacatcagc
ggctcgttcatcacgccctggtcagactcttctgcggcgcacaccgtcgagccggatttc
cacttgccgccgtgttacaacatacacgccgcaccgcctgggcccagcaaagccgcggca
ttcagcgacgagacgctattcttcatgttctactcgtcgccacgcgatcagctgcaggaa
attgctgcccaagaactatataaccgcgcatggcgcttccacaaagagtcccggttatgg
atcatcaaggagagcggcgcgtcgccatcgcaaaagatacctggcggcgaggtcggggtc
tatcagtacttcgacccggacaactgggagcgccagcggaagcagatgcaggtgctctac
tcggacctcgaggagcgcacaccgaacgtgcccgcgtttgcaggcaacatgccgcatcag
ctgcagcaacagcagcaacagtcgttccagcaaggccctgggcaggcgcaggccggacag
aatgcccagctcgcgctccagggcgcgcccgcgcaggcgttgcacatgcaactgcaggcc
cagaacgcacagcgcggctttggcagcatgggcatggccggcgttgccgcaatgtaa
DBGET
integrated database retrieval system
