Auricularia subglabra: AURDEDRAFT_109752
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Entry
AURDEDRAFT_109752 CDS
T03129
Name
(GenBank) splicing factor, CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_109752
Spliceosome [BR:
adl03041
]
Common components
Common spliceosomal components
General mRNP proteins
AURDEDRAFT_109752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-ProteinID:
EJD55422
JGI:
109752
LinkDB
All DBs
AA seq
581 aa
AA seq
DB search
MSSPSGKSLVDRIERTPDHKSSRAESVGSPHTRRSHRSRSRSRDRRDRHRDSKRDPVERR
SERGGRDRRSRSRDRSHRDRSDRDRERDKDKDKDKDRERRREREPRDSESRHRERDRDND
RERDDERRDRRRKREDEEEGSPETKEREDRSKRKRDDTEKTPSQHNGSVDGGRHSSDRRP
RSRDSDRRRDDRSRRDDRDRRDRYDNRDRRGGSGGPPGRPARPPSPPRREPSTYELAAEP
EPEEDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRISRRSKGIGYVEL
RSIDLVTKALDLSGTIVMGLPIMVQLTEAERNRVHAGENLNLPPGVSAPQGGAMQLYVGS
LHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDGFEL
AGRTLRVNSVNEKGVAVRNTTTIDSLEDSGGGNLNAASRQALMQKLARIDPPKSSQPEAR
KHIPQNQSTRSVLLLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEKDSQGEI
YVQFESVDSAKKAVDSLNGRWFGGRQVNARFISDAIMQAHR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcccagcggcaagtcgctcgtcgaccggatcgagaggactccagaccacaaa
tcatcccgtgctgaatcagtaggctcaccccacacacgccgctcccatcggtcgcgttcg
cgctctcgtgaccgcagagacaggcaccgcgactccaagcgcgaccccgtcgagaggcgc
agcgagcgcggcggccgcgaccggcggagcaggagccgtgaccgctcgcaccgggaccgg
tcggaccgcgaccgtgagcgcgacaaggacaaggacaaggacaaggaccgcgagagacgc
cgcgaacgggagccacgcgacagcgaatcgcgccaccgcgagcgagaccgagacaacgac
cgcgagcgcgacgacgagcgccgggaccgccgccgcaagcgcgaggacgaagaagaaggc
agcccagagactaaggagcgcgaggatcgctctaagcgcaaacgcgacgataccgagaag
acgccatcccagcataacggctcggtcgacggcggcagacattcgtccgataggcgacct
cgttcccgtgactctgaccggcgccgcgacgaccgctcccgcagggatgatcgtgaccgc
agagacagatacgacaaccgtgaccgtcgcggcggcagcggtgggcctccgggccgtcct
gcccgcccaccctcccctcccaggcgcgagccttcgacttacgagctcgctgcggagcct
gaacctgaagaagactctgaagcccgttcggtgttcgtctcgcagctcgcagctcgtctt
acagctcgcgacttgggttacttcttcgaggacaaacttggagaaggtgctgtgcgcgat
gctcgaattgtcactgataggatatctcgccgctcgaagggaattggctacgttgagctc
cgttccattgatctcgtcaccaaagctttggatcttagtggcacgatcgtcatgggtctc
cctatcatggtccagctcaccgaggcggagcgcaacagagtgcacgccggcgagaacctc
aacctgcctcccggtgtcagtgcaccgcaaggcggcgccatgcagctctacgtcggttcg
ttgcacttcaatctaaccgagcaagacatcaaacaggtcttcgaaccgttcggcgagctc
gacttcgttgatcttcatagggatcccggcacgggtcgcagcaagggctacgccttcgtc
cagtacaagcgtgctgaagacgccaaaatggcgcttgagcagatggacggcttcgagttg
gctggtcgaacgttgcgtgtgaacagcgtgaatgagaagggagttgccgttcgcaacacc
accaccatcgactccctcgaggattcgggtggtggtaatctcaacgcggcatcccgtcag
gcgctgatgcagaagcttgctagaatcgacccccccaagagctcacagcccgaggctcgc
aagcacatcccacagaaccagtccactcgctctgtcctgctcctcaacatgtttgaccct
gatgaggagactgaacctgactgggataaggaccttgcagatgatgtcaaaggcgaatgc
gcgagcaagtacggccctgtcaccgcgctcaaaatcgagaaggactcccagggcgagatt
tacgttcagttcgagtccgtcgactccgcgaagaaggccgttgacagcctcaacggacgc
tggttcggcggccgccaggtcaacgcgcgctttatctcggacgcgattatgcaggcgcac
cggtaa
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