Auricularia subglabra: AURDEDRAFT_109800
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Entry
AURDEDRAFT_109800 CDS
T03129
Name
(GenBank) DEAD-domain-containing protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_109800
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_109800
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_109800
Spliceosome [BR:
adl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AURDEDRAFT_109800
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
Helicases
AURDEDRAFT_109800
Pre-60S particles
AURDEDRAFT_109800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
EJD55490
JGI:
109800
LinkDB
All DBs
AA seq
552 aa
AA seq
DB search
MSDSFIEEENQDASSSSAPADTRFSSLGLSEQTMKGLADMGFTNMTAVQARTIPALLAGR
DVLGAARTGSGKTLAFLIPSIELLCRLKFKPRNGTGIIVISPTRELALQIFGVAKELMAH
HTQTYGILMGGANKKAEAEKLEKGVNLVIATPGRLMDHLQDTKGFVFRNLKALVIDEADR
ILEVGFEEQMKKIIAILPNEGRQSMLFSATQTTKVQDLARISLRPGPLLIDVDAEAQTST
VTTLSQGYVVCPSERRFLLLFTFLKKNMKKKIVVFFSSCNSVKYHAELLNYIDVPVLDLH
GKQKQQKRTTTFFEFCNAETGTLLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRT
ARAGKVGKSLLFLLPSELGFLRYLKDAKVPLNEFAFPADRIANVQSQLEKLLQKNYFLHQ
SARDGYRAYLQSYASYSLKKIFDINALDLAKVGKAFGFAVPPRVNVTVGGGSGGSGRGTS
KKRPREEEEDDDGGEDLSLEEDGGDEEAERAPRRENKQRRVEQLGKKSVEKEMYKKARDR
KRQSDSGVQWSR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcattcattgaggaggagaatcaagacgcgtcgtcaagcagcgccccggcg
gacacgcgtttctcgtcgctgggcctctccgagcagacgatgaaaggcctcgcagacatg
ggcttcacgaatatgactgccgtccaggctcgcaccatccccgccctcctcgccggtcgc
gacgtcctcggagccgcgcgcactggatcgggaaagacgctcgcctttctcattcccagc
atcgaattgctgtgtcgattgaagttcaagccgcggaacggcacgggtatcattgtcatc
tcacccacacgcgaactcgcgctacaaatatttggcgtcgcgaaggagctcatggcgcac
catacgcagacctacggcatcctcatgggcggcgcgaacaagaaagccgaagcggagaag
ctcgaaaagggtgtcaacctcgtcattgcgacaccgggtagactaatggaccacctccag
gacacgaagggcttcgttttccgtaacctgaaggcgctcgtgatagacgaggccgacaga
atattggaagttgggttcgaggagcagatgaagaaaattatcgcaatccttcccaacgag
ggcaggcagtcgatgttgttttctgcgacgcagaccaccaaggtccaagaccttgcccgc
atttcgttacgaccaggaccgctgcttattgacgtcgacgctgaggcgcaaacgagcacg
gtcacgactctttcgcaaggctacgtcgtctgcccgtctgagcgccgtttcctcctcctc
ttcaccttcctcaagaaaaatatgaagaagaagattgttgtcttcttttctagttgcaat
tcggtcaagtaccacgccgaattgctcaactacatcgacgtgccggtactcgacttgcat
ggcaaacaaaaacaacaaaaaaggacgacaacgttcttcgagttctgcaacgctgaaacc
ggcacattattatgcacggacgtcgcggcgcgtggcctggacattcctcgcgtagattgg
atcgtgcagtttgacccgccagacgacccgcgcgactacatccaccgcgtcgggcgaacg
gcgcgcgcagggaaagtggggaagagtttgctgttcctactgccgagcgaactgggcttc
ttgcggtacttaaaggacgccaaggtcccgctgaatgagttcgcgtttccggccgatcgg
atagcaaatgtgcagagccaattagaaaaactgctgcagaagaactacttcctgcatcag
tcggcgcgtgatggctaccgggcgtatctgcagtcgtacgcgtcatactcgctcaagaag
attttcgacatcaacgccctcgatcttgcaaaggtgggcaaggcgttcggctttgccgtc
cctccgcgtgtcaatgtcactgtgggcggcggctctggcggttccggccggggtacaagc
aaaaagcggccccgggaggaagaggaggacgatgatggcggggaggacctttcccttgag
gaggacggcggagacgaggaggccgagcgagctccgcgacgggaaaacaagcagcgccgg
gtggagcagctcgggaagaagagcgtggagaaggagatgtacaagaaggcacgagaccgc
aagcgacagtcagactctggcgtccagtggagcagatag
DBGET
integrated database retrieval system
