Auricularia subglabra: AURDEDRAFT_110391
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Entry
AURDEDRAFT_110391 CDS
T03129
Name
(GenBank) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
adl03015
mRNA surveillance pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_110391
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_110391
03015 mRNA surveillance pathway
AURDEDRAFT_110391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_110391
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_110391
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_110391
03012 Translation factors [BR:
adl03012
]
AURDEDRAFT_110391
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_110391
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AURDEDRAFT_110391
mRNA cycle factors
Stress granule specific factors
AURDEDRAFT_110391
Spliceosome [BR:
adl03041
]
Complex C
Other components
EJC/TREX
AURDEDRAFT_110391
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
Helicases
AURDEDRAFT_110391
Translation factors [BR:
adl03012
]
Eukaryotic type
Initiation factors
eIF-4
AURDEDRAFT_110391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF1871
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
EJD53566
JGI:
110391
LinkDB
All DBs
AA seq
396 aa
AA seq
DB search
MSALNPGDSELVFESSEAVQVVSTFDDLNLKEDLLRGIYAYNFEKPSAIQQRAILPIIQG
RDVIAQAQSGTGKTATFSISILQSIDTSLRDTQALVLSPTRELATQIQSVVLALGDYMNV
QCHACIGGTSIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRNIKLLVLDEADELLNK
GFKDQIYDVYRYLPPATQVVILSATLPYDVLEMTTKFMSDPIRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLTDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMPQKE
RDAIMQEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKG
VAINFVTVEDVRILRDIEQFYSTQIDEMPVNAAELI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcactgaaccccggcgattctgagctcgtcttcgagtcctcagaggcagtccag
gtcgtctcaaccttcgacgacctcaacctgaaggaggacctcctccgcggcatctatgcc
tacaactttgaaaaaccgtcagccatccagcagcgcgccattctgcccattatccaggga
cgcgacgtgatcgcacaggcgcagtcgggcacgggcaagacggcgacgttctcgatctcg
atcctgcagagcatcgacacgtccctgcgcgacacgcaggcgctcgtgctctcgccgacg
cgcgagctcgcgacgcagatccagtccgtcgtgctcgcgctcggcgactacatgaacgtg
cagtgccatgcgtgcatcggggggacgagcattggcgaggacatccgcaagctcgactac
ggccagcacgtcgtctccggcacgcccggccgcgtcttcgacatgatccgccgccgcaac
ctgcgcacgcgtaacatcaagctgcttgtgctcgacgaggcggacgagctgctcaacaag
ggcttcaaggaccagatctacgacgtctacaggtacctcccgcccgcgacccaggtcgtc
atcctcagcgcgacgctcccgtacgacgtgctcgagatgacgaccaaattcatgagcgac
cccatccgcatcctcgtcaagcgcgacgaactcacgctcgagggcatcaagcagttcttc
gtcgccgtcgagaaggaggactggaaatttgacacgctaactgacttatatgacaccttg
accatcacccaggccgtcatcttctgcaacacaagacgcaaggtcgactggctcacggag
aaaatgcgcgctgccaacttcaccgtctcttccatgcacggcgagatgccccagaaggag
cgcgacgccatcatgcaggagttccgcagcgggacgagccgtgttctcattacgaccgat
gtttgggcgcgcggcatcgacgttcagcaggtgtcgctggttatcaactacgatctgccc
tcgaatcgtgaaaactacattcaccgtatcggtcgttctggtcgtttcggccgcaagggt
gttgcaatcaatttcgtaacggtggaggacgtccgcattctgcgcgatatcgagcagttc
tacagcacacagatcgacgaaatgcctgtcaacgccgccgagctcatctag
DBGET
integrated database retrieval system
