Auricularia subglabra: AURDEDRAFT_110405
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Entry
AURDEDRAFT_110405 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
adl
Auricularia subglabra
Pathway
adl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AURDEDRAFT_110405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_110405
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AURDEDRAFT_110405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_SPT8
WDR54
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-ProteinID:
EJD53587
JGI:
110405
LinkDB
All DBs
AA seq
529 aa
AA seq
DB search
MEYAPVVVQQHARPGPKRSAESRYWRRFKHPVFVKEYAPVTAVHFSPAKPHRYAVTAGTR
VQVYAPRTQKVVKTISRFKDVARGANIRHDGKLIVAGDDTGLVQIFDLSSRAVLRSLDHH
KQPVHVTKFGPPSSTHVLSCSDDSTVCLWDIPSQSVVTTFDAHTDYVRSGLIASHNPHLI
LSGSYDGTMRLFDARSGSAEMLMAPSSGTGTPVEQVALFPSGTVALSAAGPILRAWDLVA
GGRCVRALSHHQKTVTSLAFDGSAGRLLTGGLDHLVKVYDVSNYKVVHTMRYPAPVLALA
VSPDDTHIGAGMSDGTFSVRRREPRAVDPNAPGADASLKTGTYEYFLGGSIAGLGMGKST
KQYKSGKGKGKEAAPNAVEEFRVLASRHKKLREYDKFLKRFKYAAALDAVLRKDVQPVTA
FSLMQELIHRDGILPAISGRDDVLLEPLLRLLVKHVTDPRFCDICCEVTSLVIDTYGLVF
GQSPLIDRLLLQLRRKIKHELRMQRELLKVRGAMDMFFAAATPAPTPAQ
NT seq
1592 nt
NT seq
+upstream
nt +downstream
nt
cgatggagtacgcgccggtcgtcgtccagcagcacgcgcggccgggcccaaaacgcagcg
cagagtcgcgctactggcgacggttcaagcaccccgtgttcgtcaaggaatacgcgcccg
tcaccgccgtccatttctcgcccgcaaagccacatcgctatgctgtcacggccggcaccc
gcgtccaggtctacgcgccgagaacgcaaaaggtcgtcaagaccatttcgcgtttcaagg
atgtcgcccgcggcgccaacattagacacgacggaaagctcatagtggctggagacgaca
ccgggcttgtccagatatttgacctcagcagtcgcgccgtccttcgttcactggaccacc
ataaacaacctgtccatgtcacgaagttcggcccgccgagctcgacccatgttctctcct
gctcggacgacagcacagtctgtctctgggacattccctcgcaatccgtcgtaacgacat
tcgacgcgcacacggactatgtccgctcgggcctcatcgcgtcgcacaacccgcacctca
tcctctccggctcgtatgacggcacaatgaggctcttcgatgcgcgcagcgggtccgccg
agatgctcatggcgccctcgagcggcacgggcacacccgtcgagcaggtcgcgctcttcc
cctcggggacggtcgcgctgagcgcggcggggccgatcctgcgcgcgtgggacctcgtcg
ctggtgggcggtgcgtgcgcgcgctctcacaccaccagaagaccgtcacctcgctagcat
tcgatgggagcgctggccgtcttctcacgggcgggctggaccacctcgtgaaggtatacg
acgtcagcaactacaaggtcgtacacaccatgcgctaccccgcgcccgtgctcgcgctcg
ccgtctcgcccgacgacacgcacatcggcgccggcatgagcgacggcacgttctccgtgc
gccgccgcgagccgcgagccgtcgaccccaatgcgccaggcgccgacgcgtccctcaaga
ctggcacgtacgagtacttcctcggcgggtccattgctggcctcgggatgggcaagtcaa
cgaagcagtataaaagtggcaaggggaagggcaaggaggctgccccaaatgctgtcgagg
aattccgcgtgcttgcgtccaggcataagaagttgcgcgagtacgacaaattcctcaagc
gcttcaagtatgctgctgcgctcgatgctgtgttgcgcaaagacgtccaacccgtgacag
cgttctcgctcatgcaagagctcattcaccgcgacggcattctacccgcgatctccgggc
gcgacgacgtactgctcgagccactgctgcgtctgctcgtcaagcacgttaccgacccgc
gcttctgcgacatctgctgcgaagtgacaagtctggtcatcgacacatacggcctcgtct
tcggacagtcgccgctgatagaccgcttgctcctccagctacgtcgcaagatcaagcacg
agctgcgtatgcaacgcgagctgctcaaggtgcgcggcgcaatggacatgttcttcgccg
cagccactcccgccccgacgccagcacaatga
DBGET
integrated database retrieval system