Auricularia subglabra: AURDEDRAFT_110801
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Entry
AURDEDRAFT_110801 CDS
T03129
Name
(GenBank) RNA-binding domain-containing protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
adl03015
mRNA surveillance pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_110801
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_110801
03015 mRNA surveillance pathway
AURDEDRAFT_110801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_110801
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_110801
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
AURDEDRAFT_110801
Spliceosome [BR:
adl03041
]
Common components
Common spliceosomal components
Cap binding complex
AURDEDRAFT_110801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-ProteinID:
EJD52983
JGI:
110801
LinkDB
All DBs
AA seq
218 aa
AA seq
DB search
MAHIVQPLDSPSGYKDSQHRLDRQRQLDQLSRSTTLYVGNLSFYTTEEQIYELFSRCTNP
EEGGGIKRIIMGLDRNTKTPCGFCFVEYYTHAEALACMRYVSGTKLDERIVRCDLDLGYA
DGRQFGRGKSGGQVRDEHRQDYDAGRGGWGAQVQADKRREREELYADVGPGAPAGGGGDW
KAADAAAPSAKRARSPGDDDDDGDRANPRFRADREDED
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacatcgtccagccgctggactcgccctcgggctataaggactcgcagcacaga
ctcgaccgccagcgccagctggaccagctctcgcgttccaccacactctatgtgggcaac
ctgagcttctacacgaccgaggagcagatctacgagctcttctcgcgctgcaccaacccc
gaggagggcggcggcataaagcgaatcatcatgggcctcgacagaaatacaaaaacgccg
tgcggcttctgtttcgtcgagtactacacccacgcagaggcgctggcctgcatgcgctat
gttagcggcaccaagctcgacgagcgtatagtccgctgtgacctcgatctgggctacgcc
gatggacgacagttcggacgcggcaagagcggtggacaggtccgggacgagcatagacaa
gactatgacgcaggccgcggcggctggggcgcccaagtccaggccgacaagcgccgcgag
cgtgaagaactctacgcggatgtcggccctggtgcaccagccggaggtggaggcgactgg
aaagcggccgacgccgcagcgccttctgcgaagcgcgcccgctctccaggggacgatgac
gacgatggcgacagagccaatcctcgattccgagcagacagagaagacgaagactag
DBGET
integrated database retrieval system
