Auricularia subglabra: AURDEDRAFT_110881
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Entry
AURDEDRAFT_110881 CDS
T03129
Name
(GenBank) replication factor-a protein
KO
K07466
replication factor A1
Organism
adl
Auricularia subglabra
Pathway
adl03030
DNA replication
adl03420
Nucleotide excision repair
adl03430
Mismatch repair
adl03440
Homologous recombination
adl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURDEDRAFT_110881
03420 Nucleotide excision repair
AURDEDRAFT_110881
03430 Mismatch repair
AURDEDRAFT_110881
03440 Homologous recombination
AURDEDRAFT_110881
03460 Fanconi anemia pathway
AURDEDRAFT_110881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adl03000
]
AURDEDRAFT_110881
03032 DNA replication proteins [BR:
adl03032
]
AURDEDRAFT_110881
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_110881
Transcription factors [BR:
adl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AURDEDRAFT_110881
DNA replication proteins [BR:
adl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AURDEDRAFT_110881
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AURDEDRAFT_110881
MMR (mismatch excision repair)
AURDEDRAFT_110881
DSBR (double strand breaks repair)
HR (homologous recombination)
AURDEDRAFT_110881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CDC24_OB3
Zn_ribbon_15
Zn_ribbon_6
DUF4503
Motif
Other DBs
NCBI-ProteinID:
EJD53132
JGI:
110881
LinkDB
All DBs
AA seq
617 aa
AA seq
DB search
MTIELTSGAIARMCDTTLPADDPVWKTEPILQVVQIKEIVSNKNGGSSNRRRGLVSDGRN
YAPVMFTTQLNQQIEEGKLGRNAVVRVKSMTCNTMQEKRLIVLLEVEVLEALEYKIGEPK
GVDKEGATTAAAGSEAGAESSAAAARAAPLPPAAQQPAPAKQVQQAPRAQQQAASAPAAS
RSGPPQPVYPIEGLSPYQNKWTIQARVTNKSEMKSWSNTKGEGKLFSCTFMDQSGEIRAT
AFNTAAEELFEKLKEGNVYYVTKARVSVAKKKFSNLPNEYEITMDRNTEIEEIVDDDIDV
PLQKYEFVSLKTLDTLNKDEVCDVIGVVQEVGPVNKFLAKTTQRELTKRDLTIVDQSECS
VRLTLWGKQAENWSRDDKPVVAFKGCKVGDFGGRTLSLLSSGSLAIDPDLEESHRLRGWF
DAQGKDATFHSFSSGGGGVASGPIDRLEAMPLAAVREMEIVIDQPQLFVTRAAVVHVKAD
DKMWYAACQRCNKKISEASGKWRCEHCKQNWDEPSYRYMLSIAVADNTSQCWLTAFNDAG
LTIVGQSGNDLHKIKGQDESGFNAIVKKAVGKYYTFSCRAKSETYQDLTRTKYTISRLQP
LDWKQEIDDLEKIIQSY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgagcttacctccggcgccattgcgcgcatgtgcgacacgacgcttccggcg
gacgaccctgtatggaagacggagccgattctgcaggttgtgcagatcaaggaaatagtg
tccaacaagaacggcgggtccagcaaccgcaggcgcggcctcgtcagcgacggcagaaac
tacgccccggtcatgttcacgacccagctcaaccagcagattgaggagggcaagctgggc
cgcaacgccgtcgtccgcgtcaagagcatgacctgcaacaccatgcaggagaaacgcctt
atcgtgctcctcgaggtagaggtcctcgaggccctcgagtacaagattggggagcccaag
ggcgtcgacaaggagggcgccacgactgccgccgctggtagcgaggccggcgcggagtca
tccgccgccgccgcccgcgccgccccgctgccgcccgcggctcagcaacctgcgcctgct
aagcaggtccagcaagccccgcgtgctcagcaacaggctgcgtctgcccccgcggcgtcg
cgctccggccctccgcagccggtgtacccgattgagggtctcagcccgtaccagaacaag
tggaccatccaggcgcgcgtcacgaacaagtccgagatgaagtcatggtccaacacgaag
ggtgaaggcaaactcttcagctgcacgttcatggaccagagcggcgagattcgcgccacc
gcgttcaatacggccgccgaggagctctttgagaagcttaaggagggcaacgtttactac
gtcaccaaggcccgcgtctccgttgccaaaaagaagttttccaacctgcccaacgagtat
gagatcaccatggacaggaataccgagatcgaggagatcgtcgacgacgatatcgacgtt
ccgttgcagaagtacgaattcgtgtcactgaagacacttgatactcttaacaaggacgaa
gtctgcgatgtcattggcgttgtccaggaagtcggccccgtgaacaagtttttggcgaag
acgacgcagcgcgagctcacaaagcgcgacttgaccattgttgaccagagcgagtgctcc
gtccgcctcacgctgtggggcaagcaggcggagaactggtcgcgcgacgacaaacccgtc
gttgctttcaaggggtgcaaggtcggcgattttggaggccgcacgctttcgcttctgagc
tctgggtcgttggccattgaccccgacttggaggagtcgcaccgtctgagaggctggttc
gacgctcagggcaaggacgcgacattccactcgttcagcagcgggggaggcggcgtcgcc
agtggccctatcgacaggctggaggccatgccattggccgctgtgcgcgagatggaaatt
gtcatcgaccaaccgcagctgttcgtcacgcgcgcagccgtcgtgcacgtcaaggccgac
gataagatgtggtacgctgcgtgtcagaggtgcaacaagaagatcagcgaagcgagcggc
aagtggcgctgcgagcactgcaagcagaactgggatgagccctcctatcggtacatgctg
agcatcgccgttgcggataacaccagccagtgttggctcacggcgttcaacgacgcgggt
ctcaccatcgttggccagagcgggaacgacctccacaagatcaaggggcaggacgagtcg
ggattcaacgccattgtcaagaaggcggttggcaagtactatactttctcgtgccgcgcc
aaatccgagacgtaccaggacctaactcgcacgaagtacacaatcagtcgtctgcagcca
ctggactggaagcaggagatcgatgaccttgagaaaatcatccagtcgtactga
DBGET
integrated database retrieval system