Auricularia subglabra: AURDEDRAFT_111121
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Entry
AURDEDRAFT_111121 CDS
T03129
Name
(GenBank) transcription regulator
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_111121
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_111121
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
AURDEDRAFT_111121
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
AURDEDRAFT_111121
SLIK complex
AURDEDRAFT_111121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
Chromo_MIT1
DUF3644
Motif
Other DBs
NCBI-ProteinID:
EJD52396
JGI:
111121
LinkDB
All DBs
AA seq
1435 aa
AA seq
DB search
MSSDDSRSPSPADNPKIPLDAEFAPSDQDASASPESSPAQANGAHDAHDAHRSSEPAYPA
QAKYDDGLSDDGSFGDQEFTTSTKKAAPKRKKATSAAAKVFKPTPRPSASDSDSEYGSRP
RKKRKSRANDNDYRISSSRGGKVPNYKEEGEDFGLDDDAEYDKAYYAQQALAPAATEEEQ
HEIEMVINHFRDEDRKGDPADVWTENIRFHIKWKNYSHLHNTDELYDFLKHCRGFKRVEN
YINKYKQWEAAYTSPHASLEDKEAMALERERMIEDHETHKLVERVVTEKVEGGVTKYFCK
WQGLNYEQCTWEDAEEISTIARDQIEAYQDREKRGLFPARSEIYNRDRRPQFTQIPSDPD
FVVVTGNQLKDFQLTGLNWLAYLWHNGENGILADEMGLGKTVQSVVYLSYLFHRMRQLGP
FLVIVPLSTIPAWQSTFQNWAPDLDVITYQGNSRARSIIRHYEFGQTGGHKKPQLKFNVL
LTTYELVLKDASELSGIKWLALAVDEAHRLKNHESQLYEALRAFSASSKLLITGTPLQNN
VKELLALMHFLMPERFPLTNDFDLNDADHESKIKELHSQLEGLMLRRLKRDVIKSLPTKK
EQILRVEMSTLQTHYYKNILTKNFTALSKGAAGGGGHISLLNIAMELKKAANHPYLFDGA
EAPAASPEETLKALVMSSGKLVLLDKLLARLRADGHRVLIFSQMVRMLDILTDYMHLRGY
PHQRLDGTVSSDERKKAIAHFNAPGSLDFVFLLSTRAGGLGINLETADTVIIFDSDWNPQ
NDLQAMARAHRIGQKSHVNVYRFVSKDTMEEDVLERAKKKMVLEYAIINQVDTSQGQFSA
KADKKDKDPSKPADLSKDELTAVLKYGAQKMFTKDDIEQTKKLDEMDLDDILGSAEDHET
IAGGGAGASLGGEGFFQQMATVTDVKADLSWDEIIPLEERVKAEEDEREAAMKDTGPRKR
THAQVSYEGMDVAEPPMPAPPKKNKAPSASRKTAAQRAMDLKERDIRVLVRSLQRWGDIR
LRYDIIVKESRLEDKNRQLIVETCDEIVDFCKQAVEEHHDHLKNKGPALGVNAITQKSKA
ILITFRNVQNINAETVISRVHELKILYEYLNPISQSEEIYQWQLPVENVRPTLNWSCKWG
TTEDAMLLVGAFLHGFGNWEAIQKDEALHLNDKFFLDESKKTDDNGSKPIPNAIHLVRRG
DYLLQILRDHWEKIRTYETSLKRRDAKRSLSPVPSTSTSGYGHKRRAESPPQTEYHRGYS
HHVEEEPPKKKKRRATPEFTDTEPSSDECSSMDEAQTKDALRPVKKHLKNLKLTTNDMPR
EEKVAVLKDALAAIGSQIEDVLATKQAIGEDPEKWRKHLWMFVTLFWPRKVKHAKLQEIH
ARMITNSAQPTPSSSKKHRQPSLSGGAPPQIAPRHSNGGGPSMPGSASRSNGRHY
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagacgactcgcgctcgccgtcgccggccgacaacccaaagatccctctcgac
gccgagtttgcgccctcagaccaggacgcctcggcgtcgccagagtcctcgcccgcccag
gccaacggcgcccacgacgcccacgacgcccacagatcgtccgaacccgcatatcccgcc
caggccaagtacgacgacggcctctccgacgacggctccttcggcgaccaggaatttaca
acaagcaccaagaaggccgcgccaaagcgcaaaaaggccaccagcgcggccgccaaggtc
ttcaagccgactccccggccatcggcttccgacagcgactccgagtatggctcccggcct
cgcaagaagcgcaagtcacgcgccaatgacaacgactaccgcatctcctccagccgcggc
ggcaaagtccccaactacaaggaggagggcgaagatttcggccttgacgacgacgcagag
tatgacaaggcctactacgcccagcaggctctcgcgcccgccgccaccgaggaggagcag
cacgaaatcgagatggtcatcaaccacttccgcgacgaagaccgcaagggcgaccccgcg
gacgtctggaccgagaatattcgcttccacatcaagtggaagaactactcgcacctccac
aacaccgatgagctctacgacttcctgaagcactgccgtggcttcaagcgcgtcgagaat
tatatcaacaagtataagcagtgggaggccgcctataccagcccccatgcgtcgctcgag
gacaaggaggccatggcgctcgagcgcgagcgcatgatcgaggatcacgagacgcacaag
ctcgtcgagcgcgtcgtgaccgagaaggtcgagggcggcgtcaccaagtatttctgcaag
tggcaaggcctcaactacgagcaatgcacctgggaggacgcggaggagatcagcaccatc
gcgcgcgaccagattgaggcgtaccaggaccgcgagaagcgtgggctgttccccgcgcgc
tcggaaatctacaaccgcgaccgccgcccgcagttcacgcagatcccgagcgacccggac
ttcgtcgtcgtcacgggaaaccagctcaaggatttccagctcaccggcctcaactggctc
gcctacctctggcacaacggcgagaatggtatcctcgcggacgagatgggcctcggcaag
acggtgcagagcgttgtctacttgtcgtacctcttccaccgcatgcgtcagctcgggccc
ttcctcgtcatcgtcccgctctccaccatccccgcgtggcagtcgacattccagaactgg
gcgcccgacctcgacgttatcacgtaccagggcaactcgcgcgcccggagcattattcgc
cactacgagttcggccagacgggcggccacaagaagcctcagctcaagttcaatgtgctc
ctgacgacctacgagctcgtgctcaaggatgcgtctgagctctcgggtatcaaatggctc
gcccttgctgtagacgaggcccaccgcttgaagaatcatgaaagccagctctacgaggct
ctgcgcgcgttttccgcgtcctcaaagttgcttatcacgggtaccccgctccagaacaac
gtgaaagagctgctcgcgttgatgcacttcctcatgccagagcgattcccgctcacgaac
gacttcgacttgaacgacgctgatcatgagagcaagatcaaggaactgcactcgcagctc
gagggtctcatgctccgtcgcctcaagcgtgatgtcatcaagtcgctcccgacgaagaag
gagcagatcctacgcgtcgaaatgagtactttgcagacgcattactacaagaacatcctg
acaaagaacttcaccgccctgtccaaaggagctgccggcggcggcgggcatatcagtctc
ctcaacatcgccatggagctcaagaaggctgccaaccacccgtacctgtttgacggcgcg
gaagctcccgctgcgtcgcccgaggagacgctcaaggccctggtcatgagcagcggcaag
ctggtccttctcgacaagctgctcgccaggctgcgggcggacgggcaccgcgtgctcatc
ttcagtcagatggtccgcatgctggacattctgaccgactacatgcacctccgcgggtat
ccccaccagcggctggacggaaccgtgagctcggacgagcgcaagaaggcgatcgcccac
ttcaacgccccgggctcgctcgactttgtcttcctgctgtccacgcgcgcgggcggattg
ggcatcaacctcgagactgcggacacggtcatcatctttgatagcgactggaacccgcag
aatgacctgcaggcgatggcgcgcgcccaccgcatcgggcagaagtcccacgtgaacgtg
taccgcttcgtgagcaaagacacgatggaggaggacgtcctcgagcgcgcaaagaagaag
atggtcctcgagtatgccattatcaaccaggtcgacacctcgcagggtcagttcagcgcg
aaggccgataagaaggacaaggacccgtccaagccggccgacctcagcaaggacgagctc
acggccgtgctcaagtacggcgcccagaagatgttcaccaaggacgacatcgagcagacg
aagaagctcgatgagatggacctcgacgacatcctcggcagcgccgaagaccatgagacg
attgctgggggcggtgccggcgcgtcgcttggcggcgaagggttcttccagcagatggca
accgtgacagacgtcaaggccgacctgagctgggacgagatcatcccgctcgaggagcgc
gtcaaggccgaggaggatgagcgcgaggccgcgatgaaggacacgggcccgcgcaagcgc
acccacgcgcaggtctcgtacgagggcatggacgtcgcggagccaccgatgcccgcgcca
cccaagaagaacaaggcgccgtccgcgtcgcgcaagacggcggcgcagcgcgcgatggac
cttaaggagcgtgatatacgcgtcttggtccgcagcttgcagcgctggggcgacatccgc
ttgcgctatgacattatcgtcaaggagtctcgcctcgaggacaagaaccggcagctgatc
gtggagacatgcgacgagattgtcgacttctgcaagcaggcggtcgaggagcaccacgac
cacctcaagaacaagggccccgccctcggcgtgaacgccatcacgcagaagagcaaggcg
atcctcattacgttccgcaacgtccagaacatcaacgcggagaccgtcatctcacgcgtc
cacgagctcaagatcctctacgagtacttgaacccgatctcgcagagcgaagaaatctac
cagtggcagctgcccgtcgagaacgtgcggccgacgctcaactggtcgtgcaagtggggc
accacggaggacgcaatgctcttggtcggcgcgttcctgcacggcttcggcaattgggag
gccatccagaaggacgaggcgctgcatctgaacgacaaattcttcctcgacgagagcaag
aagacggacgacaatgggtcgaagcccattccgaacgccatccacctggtgcgccgtggc
gactatttgctccagatactccgcgaccattgggagaagattcgcacatacgagacgtcg
ctcaagcgtcgcgacgccaagcgctccctcagccccgtgccgtccaccagcacgagcggg
tacggccacaagcgtcgcgcggagagtccgccgcagaccgagtatcaccgcggctatagc
catcatgtcgaggaggagccgcccaagaagaagaaacggcgcgcgacgcctgaattcacg
gatacggaaccgtcttcagacgaatgctcttcgatggacgaggcgcaaacgaaggatgcg
ctgcggcccgtcaagaagcacttgaagaatctgaagctgacgacaaacgacatgcctcgc
gaggagaaggtcgctgtactcaaggacgcgctcgctgccattggttcacaaatagaggac
gttttggccaccaagcaggccatcggcgaggatcccgagaagtggcgcaagcacttgtgg
atgtttgttacgctgttctggcctcgaaaggtcaaacacgcgaagctgcaggaaatccac
gcgcgcatgatcaccaacagcgcgcagcccacgccgtcatcgagcaagaagcaccggcag
ccctccctcagcgggggcgccccgcctcagatagccccgaggcattcaaatggcgggggc
ccatcgatgcccggctctgcgtcgcgctcgaacggtaggcactattaa
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