Auricularia subglabra: AURDEDRAFT_111199
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Entry
AURDEDRAFT_111199 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
adl
Auricularia subglabra
Pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_111199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_111199
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_111199
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_111199
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
AURDEDRAFT_111199
Spliceosome [BR:
adl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
AURDEDRAFT_111199
Complex B
AURDEDRAFT_111199
Complex C
U2 SnRNP specific factors
AURDEDRAFT_111199
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
AURDEDRAFT_111199
TFTC complex
AURDEDRAFT_111199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-ProteinID:
EJD52535
JGI:
111199
LinkDB
All DBs
AA seq
1214 aa
AA seq
DB search
MHLYNLTLQAPSAVPQAIVGNFSGARHQEIIVSRGTRLELLKPDPTSGKLTSVLTHDVFG
AVRSLVAFRLTGGTKDYAIVGSDSGRIVILDYDPKANEFKRLYTETYGKSGARRIVAGQY
LAVDPKGRAVMIAAMEKSKLVYILNRDAATNLTISSPLEAHRNQSILFHITGVDVGFENP
LFAALEIDYGESDQDPTGEAFHNAEKMLTFYELDLGLNHVVRKWSEPTDPRANFLVQVPG
GTSASSPDKFDGPSGVLVCCENHIIYRHMDHPQHRVPIPRRRAPLDSEERGLIIVAAVMH
KMKGAFFFLLQSEEGDLYKVTIDHQDDEVTSLKIKYFDTVPVSSSLCILKSGFLFVASDF
GPHHLYQFQKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRLLENLLLCDSLDSIN
PIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVWTT
KIRADDPFDTYIVLSFVNGTLVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPH
GIRHILADKRVNEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNEYQDRKA
MGSVVLALSMAEVPEGCQRTPYLAVGCEDQTVRIISLDPDNTLETISLQALTAPPSAICI
VAMIDAAVNKISETLFVNIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNRVTIAG
KPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGSTIKIFQIT
KIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEAVHGALQQPDLKKYDRDV
LELPPEVFGHPRAPAGIWASCVRIVNPVELTTIYRLDLDNNEAAFSIALVPFSARDNELT
LVVGTAKDAFLAPRSCTSGYLRTYRVLDDGRGLELLHKTECDDIPLSLLAFQGKLVAGIG
KCLRIYDMGKKKLLRKAESKLFTTAITSLSTQGARIIAGDAQQSIFFCVYKAAENRLLVF
ADDSQQRWTTSQLMLDYNTVVAGDKFGNVFVNRLSDHVSNLVDDDPTGAGLLHEKGMFMG
APHKTSMLCHFHVGDIIMSLQRTSLVPGGREVIVYFGLHGTIGMLVPFASKEDVDFFTTL
EQHMRSENLSLVSRDILAWRGYYVPVKAVVDGDLCEYFAKLPQGKQGGLAGELDRTVGEV
LKKLEMIRVNASGF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtacaacctcacgctgcaggcgccgagcgccgtgcctcaggctatcgtaggc
aacttttctggcgcacgacaccaggaaatcattgtttccagaggaacgcgcctcgagctg
ctcaagcctgacccaacgtccggaaagctcacctccgtccttacccacgacgtctttggc
gccgtccgctcgctcgtcgccttcaggctcaccggtggaaccaaagactacgcgattgtc
ggttcggactcgggcagaattgtcatcctcgactatgaccccaaggcgaacgagttcaag
cggctctacactgagacgtacggcaagtctggcgcgcgtcgcatcgtcgctggacagtac
ctcgccgtcgatcctaagggccgtgcggttatgatagctgcgatggaaaagtcgaagctg
gtctacattctcaaccgcgatgctgcgacgaacctcaccatctcgtcaccgcttgaggcg
catcgcaaccagtccattctttttcacatcaccggcgtcgacgttggcttcgagaacccg
ctctttgctgcgctcgaaatcgactatggcgagtcagaccaagacccgactggcgaggcg
ttccacaacgctgaaaagatgctcaccttctacgaacttgacctcggtctcaaccatgtt
gtccgcaaatggtcggagccgacagaccctcgcgcgaatttcctcgtccaagtgcccggc
ggcacgtctgcatcctcgcccgataagttcgacggaccgagtggtgttctcgtgtgctgc
gagaaccatatcatctaccgacatatggaccaccctcagcatcgcgttcccattcctcgc
cgaagagctccgctcgacagcgaagaacgcggtctaattattgtcgctgctgtcatgcac
aagatgaagggcgcgttctttttcttgctgcagtcagaggagggcgatttgtacaaggtc
accatcgaccatcaggacgacgaagtcacttccctgaagattaaatacttcgataccgtc
ccggtctcgtccagtctctgcatcctcaagtccggtttcctgtttgtcgcgtctgacttc
gggccacatcatttgtatcagttccaaaagcttggcgacgatgatgcagagaccgagttc
agttcgtcatcgtacccgaagaacggcatggcagacccagacgaggccttaccgtcggca
tacttccagcctcgcctcttggagaacctcctcctctgcgactcgctcgactccatcaac
ccgattatcgacgcgaaagtgctgaacctcatgcccaccatctccgacacaccgcagttc
tatgtcgcttgcggccgcggcgcgcggagctccttcagactcctgcgccacggtctcgag
gtcgaggagaacatctcgtccgacctgccctccggcatccccaacgcggtgtggacgacg
aagatccgagcggacgacccgttcgacacgtacatcgtactttcgttcgtcaatggcacg
ctcgtgctcaccatcggcgagaccatcgaggagtgccaggagacgggcttcctcagcgcg
gagcctacgctcggtgtccagcagatcggcgacgacgcactgctgcaggtgtacccgcac
ggcatccgccatatccttgcggacaagcgcgtcaatgagtggaaggtcccttctgggaag
accatcgtccaggctgccacgaactcgcgtcaggtcgtcgttgcgctcaactcggctgag
ctggtgtacttcgagctcgacttggatggtcagttgaacgagtatcaagatcggaaggct
atggggagcgtcgtacttgccctgagtatggcagaagtccccgaaggttgtcaacggaca
ccatatctggccgtaggatgtgaggatcagactgtccgaatcatctcgctggaccccgat
aatacgcttgagaccatcagcttgcaagcgttgaccgccccgccgtcggccatttgcata
gtggccatgatcgatgccgccgtgaacaagatctcagaaacactcttcgtcaatatcggc
ttgacgaatggtctcttcttgcgaacggtgctcgacccggtcaccggtgaattgacagat
acgcgtactcgattcttgggcacccgcccaatccggctgaaccgcgtaactatcgccggg
aaacctgctctgctcgccctgtcgtcgcgaatgtggttgaactacgcgcaccaggaggcg
ctgcacttgacgccgctcatattcgacccactggattatgtaagcggcttcaccgccgac
ctctgccccgatggcttcatcggcctgaaaggtagcactatcaaaatcttccagataacc
aaaatcgggcagcggttgaagcacgaggtgatgccgctctcctacaccccgcgcaaaatc
gctgtgcacccgatgaacggactcttctacatcgcggagagcgaccaccggacgcacagc
caagaggcggtacacggcgcgctgcagcagccggacctgaagaagtacgaccgggacgtg
ctcgagctgccgccggaagtgtttgggcacccacgtgcgccagcaggcatctgggcgtcg
tgcgtccgcatcgtcaacccggtcgagctcacgacgatctatcggctcgacttggacaac
aatgaggctgctttctcgatagcgctcgtccccttctcggctcgggataacgagctcaca
ctcgtggtcggtactgcgaaagatgccttccttgcaccgcgtagttgtaccagtggatat
ctgcgaacctaccgggtcctggatgacggtcgcggcttggagttgttgcacaagaccgag
tgcgacgacatacctctatcgttgttggctttccagggcaagttggttgcgggtatcggc
aagtgcctccgcatatacgacatgggcaagaagaaattgttgcgcaaggcggagagcaag
ctgttcaccaccgcgatcacctcactttcaacacagggcgctcgcatcattgccggcgat
gcccaacagtccatctttttctgcgtctacaaggccgcagagaaccggttgcttgtcttc
gccgacgactcacaacagcgttggacgacgtcccaattaatgctggactacaacacagtc
gtggcgggcgacaagttcggcaacgtgttcgtaaaccgactatcggaccacgtcagtaac
ttggtcgacgatgaccccaccggcgccggtctgctgcacgagaaggggatgttcatgggc
gcgccgcacaagacgtccatgctctgccacttccacgtgggggacatcatcatgtcattg
caacggacgtccctcgtgcccggtggccgggaggtcatcgtgtacttcgggctgcacggt
acgatcggcatgctggtccccttcgcgtccaaggaggacgtcgacttcttcacgacgctc
gagcagcacatgcggtcggagaatctcagtctcgtctcgcgcgacatccttgcgtggaga
ggatactatgttcccgtgaaggcagtcgttgacggcgatctgtgcgagtacttcgccaag
ctgccccagggcaagcagggcggccttgcgggcgagctggaccgcacggttggcgaggtg
ctcaagaagttggagatgatcagagtcaatgcatctggtttctag
DBGET
integrated database retrieval system
