Auricularia subglabra: AURDEDRAFT_111368
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Entry
AURDEDRAFT_111368 CDS
T03129
Name
(GenBank) glucose-repressible alcohol dehydrogenase transcriptional effector
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_111368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_111368
Enzymes [BR:
adl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
AURDEDRAFT_111368
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_111368
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURDEDRAFT_111368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_1
LRR_14
LAP1_C
LRR_LRWD1
Motif
Other DBs
NCBI-ProteinID:
EJD52827
JGI:
111368
LinkDB
All DBs
AA seq
637 aa
AA seq
DB search
MTPHWQNQLVKAETCRASSSAHHRARQSALATRNSTKSAIPITDPSRALKLTAPPGAENG
ANDGASDSTDGELAVPGSGVQPNSTPGATANGQHPSATVAPIVARPRPTAVVKHTSTWTT
LDMGGIRLKNVAPALFSYSFLTTLYLNHNQLTAVPPEISRLRALTVLDLTGNQLVAVPPE
LGLIASLKELYLFDNHISTLPPEFGSLHQLEMLGVEGNPLDQTLKAIIQKDGTPALIAYL
RDSGPVPAPPPERTWRSLVSDAERKLVDADPASETFSVLCYNILCQWYAPSAMYGYTPTW
ALAWDYRKELILTEIMNYDTDFLCLQEVDQAQYTSYFLHHLQGQDYDGIYWPKSRARSAS
DVDKGKVDGCAIFYKKNKWRLLDKQLLDFQSMAMQRADFDKSQTMFTRVFAKDNIAVVGA
FENIATGTRLIVSNVHIHWNAEFRDVKLVQVALLMDEVDKMAQRVAAMPPQPVEEGQRPR
PTYSDGSKVPTIVSGDFNSVHDSGVYEFLANGAVSGDHEDFLGHNYGAYTNSGPRHPFSL
KNAYANVPELTMTNYTPGFVGVLDYIWYSGQTIAATSVLGEVDAGYLAKCVGFPNAHFPS
DHVCLSAEFRIKPQKDTARNAAQTNGTNGVQSQRTPS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaccccacactggcagaaccagctagtcaaggcggagacatgtcgcgcctcgtcgtcg
gcacaccatcgagcacggcagtccgcgttggcaacccggaattcgacaaagtcggccatc
cccataacggacccatctagggcgctcaagctgacagcgccgccgggcgcagagaacggc
gcgaacgacggtgcgtccgactcgacggacggcgagctcgccgtccccggctccggtgtc
caacccaattcgactccgggcgcgacggcaaacggccaacatccgtccgcgacggtggcg
cccatcgtcgcacgcccgcgccccacggcggtcgtaaagcacacgagcacatggacgacg
ctagacatgggtggcatccggctcaagaatgtcgcccctgccttgttcagctattccttc
ctcacgacgctctacctcaaccataaccagctcaccgccgtcccgcccgagatctcgcgg
ttacgcgccctgacggtcctcgaccttacgggcaaccagctcgtggccgtgccgccagag
cttggcctgatagcgtcgctcaaggagctctacctgttcgacaaccacatcagcacgctc
ccgcccgagttcggtagcctacaccagctggagatgctcggcgtcgagggcaatccgctt
gaccagacgctgaaggcgatcatccagaaggacggcacgcccgcgctcatcgcatacctg
cgcgactccggccccgtacccgcgccgccgccagagcgcacctggcgctcgctcgtctcg
gacgcagagcgcaagctggtggacgcggatccggcgagcgagacgtttagcgtgctctgc
tacaacatcctctgccagtggtacgcgccgtccgccatgtacggctacacgcccacctgg
gccctcgcgtgggactaccgcaaggagctcatcctgaccgaaatcatgaactacgacacg
gacttcttgtgcctccaggaagtcgaccaggcgcagtacacgagctacttcctgcaccac
ctgcagggtcaggattacgacgggatctactggccgaaatcgcgcgcgcggtccgcgagc
gacgtcgataagggcaaggtggacggctgtgccatcttctacaagaagaacaagtggcgt
ctcctggacaagcagctgctcgacttccaatccatggcgatgcagcgggccgacttcgac
aaatcgcagacaatgttcacccgcgtcttcgcgaaggacaacatagccgtggtcggcgcg
ttcgagaacatcgcgacgggcacacggctaatcgtgtccaacgtgcacatccactggaat
gccgagttccgcgacgtcaagctcgtgcaggtcgcgctgctcatggacgaggtcgacaag
atggcgcagcgcgtcgccgccatgccgccacagcccgtcgaggagggtcaacgtccacgg
ccgacctattccgatggcagcaaggtcccgacgatcgtctccggcgacttcaactcggtg
cacgacagcggtgtctacgagttcctcgcaaacggcgccgtttcgggcgatcatgaagac
ttcctcggccacaactacggcgcgtacacaaattccggcccaagacatccgttctcgctc
aagaacgcgtatgccaacgtgcctgagctgaccatgaccaactacacgccgggattcgtg
ggcgtgctggactatatttggtactctgggcagacgatcgccgcgacgtcggtccttggc
gaggtcgacgccgggtatctggcaaagtgtgtcgggttcccgaacgcccacttcccgtcc
gaccacgtttgcctcagcgccgagttccgaatcaaaccccagaaggacacggcgcgcaat
gccgcgcagacgaacggcacgaacggcgtacaatcccaaagaacgccgtcctga
DBGET
integrated database retrieval system
