Auricularia subglabra: AURDEDRAFT_111380
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Entry
AURDEDRAFT_111380 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_111380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_111380
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
AURDEDRAFT_111380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
EJD52856
JGI:
111380
LinkDB
All DBs
AA seq
359 aa
AA seq
DB search
MSLPEEVETEDVKGFAPTEDTQIETEPDPDESLHLDQAHSMWMVKMPKFLLKRWTSVTEA
NIHLATIRVYDEVDPVTKTQRMEIILPDDPNEPDVEMTQSTLSTEPSSQQDEDTMDPAAL
YMKLTAELEAELQRAKEYELQMIDLNVNNQLVIAERDLTDPPSRTKATTRNGKIRHECNL
QPIMNARYRRIIKERVRIANMSKRPIMRMEEVLETQAINRLASGVPSGPPVSSTWQPSRS
QKPQARKGEFERFARMPRNELYDALFERFKEKPDWSLKELRARTQQPEAYLKEVLAEVAT
LHRSGEKVGLWTLKTNYSSSSTHADVKYEAGSTPQDGMDEDEDDDDDDDDEEDDMEEIS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccgaggaagtcgagacggaagacgtgaagggcttcgcgcccacagaagac
acccagatcgaaacagaacccgacccagacgagtcgctgcacctggatcaggcccacagc
atgtggatggtcaagatgcccaaattcctgctaaagcgctggacgagtgtgacggaggcc
aacatccacctggcgaccatccgcgtgtacgacgaggtcgacccggtcaccaaaacacaa
cgcatggagattatattgccagacgatcccaatgagcccgacgtcgagatgacccagtcg
acgctctctacggagccgagcagccagcaggacgaggacaccatggaccctgcggcgctc
tacatgaagttgacggctgagcttgaggccgagctccagcgcgcgaaggagtacgagctc
cagatgatcgacctgaacgtcaacaaccagttagtgatcgcggaacgcgatttgacggac
ccaccatcgcgtacaaaggctacaacgcggaatggcaagatacgccacgaatgcaacctc
caaccgatcatgaatgcgcgctaccggcgcatcatcaaggagcgcgtccgcattgccaac
atgtccaagcggcccatcatgcggatggaggaagtcctcgagacccaagcaatcaaccgt
ctcgcgtcgggcgtgccctccggcccgccggtgtcgtcgacatggcagccctcgcgctcg
cagaagccgcaggcacgcaagggcgagttcgagcgcttcgcgcgcatgccgcgcaacgag
ctctacgacgcgctcttcgagcgcttcaaggagaagcccgactggtcgctcaaggagctg
cgtgcgcgcacccagcagcccgaggcgtacctcaaggaggtgctcgccgaggtcgccacg
ctgcatcgctccggcgagaaggtcggcttgtggacgctcaagacgaattactcgtccagc
agcacacacgccgacgtcaagtacgaggccggctcgacaccgcaggacgggatggacgaa
gacgaagacgacgatgatgacgacgacgacgaggaggatgacatggaggagatttcgtag
DBGET
integrated database retrieval system
