Auricularia subglabra: AURDEDRAFT_111514
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Entry
AURDEDRAFT_111514 CDS
T03129
Name
(GenBank) DNA-dependent RNA polymerase II second largest subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
adl
Auricularia subglabra
Pathway
adl03020
RNA polymerase
adl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AURDEDRAFT_111514
09124 Replication and repair
03420 Nucleotide excision repair
AURDEDRAFT_111514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_111514
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_111514
Enzymes [BR:
adl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AURDEDRAFT_111514
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AURDEDRAFT_111514
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AURDEDRAFT_111514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
C1_1
Motif
Other DBs
NCBI-ProteinID:
EJD51976
JGI:
111514
LinkDB
All DBs
AA seq
1217 aa
AA seq
DB search
MSQYGTQYDYEEEERYQEDEYEDITQEDCWTIISSFFEEKGLVRQQLDSFDEFVQNTMQE
LVDENAELILHQGDQHTGQEGDANLRHEIKFGQIYLSRPTITEADGSVTPVFPQEARLRN
LTYSAPLYVEMRRSRLTGRESMTKPGDYDWQRDPNESTTMQKIWIGKVPIMLRSSFCILK
TLSDRDLYDLNECPYDQGGYFIINGSEKVLIAQERMAANHVYVFAKAQPSPINFLAEIRS
AVEKGGKTISSFQVKMFHRNQEKTSGNTIKATIPYIKQDIPIWIVFRALGVMSDRDILEH
ICYDMHDVTMLEMLKPCIDEGFVIQEREQALSFIGVRGTTTGLNKERRLRYAQEILQKEM
LPHISMAEGSESKKAYFLGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLASLFRML
FRKLTKDVYRYLQKCVEARKEFNLSLAVKANTITNGLKYSLATGNWGDQKKSMSAKAGVS
QVLNRYTFASTLSHLRRTNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLA
LMACISVGSLSAPVIEFLEEWGLESLEENAHSGVPSTKVFVNGVWMGVHRDPANLVKTIK
KLRRKDDISPEVSVVRDIREKELRLYTDAGRVCRPLFIVEDQQLVIKKHHVEWIQNKEDE
SGAPYKWDNLIKTGVIELLDAEEEETVMICMTSDDLENSRLMSRGLAPRDADNEFDPAAR
LKSVVNAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYLTNFQVR
QDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSVIMNQSSIDR
GLFRSIYYRSYMDVEKKSGMVALEEFEKPTRDTTLRMKHGTYDKLEDDGLIAPGTGVAGE
DIIIGKTAPLPQDSEELGQRTRTHQKRDVSTPLKSTENGIVDQVLITTNQDGQKFVKIRI
RSTRVPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGVTPDIIINPHAIPSRMTIGHLVE
CLLSKVATMIGNEGDATPFTDLTVESVSQVLRQRGYHSRGLEVMYHGHTGRKLQAQVYLG
PTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGLAAFLK
ERLFDASDAYRLHVCDICGLTAIANLKKQSFECRACKNKVAVSQLYIPYAAKLLIQELQS
MNIAARLYTVSTGRTRD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatatggcactcaatatgactacgaggaggaggagcggtaccaggaggacgaa
tatgaggacataacgcaggaagactgctggaccatcatctcgtccttcttcgaggaaaag
ggcctcgtgcgccagcagctcgactcgttcgacgagtttgtccagaacacgatgcaagag
ctcgtggacgagaacgccgaactcatcctgcaccagggtgatcagcacaccggccaggag
ggggacgctaaccttcgtcacgagatcaagttcggccagatttatctctcgcgcccgacg
attacggaggcggacggtagcgtcacgcccgtcttcccgcaggaggcgcgtctgcgcaac
ctgacctactctgcgccgctctacgtcgaaatgcggagatctcgcctcaccggtcgcgaa
agcatgaccaagccgggcgactatgactggcaacgagacccgaacgagtcgaccaccatg
cagaagatctggattgggaaggttcccatcatgctccggtcgagcttctgcatcttgaag
acgctctcggaccgcgacctgtacgacttgaacgagtgcccctacgaccaaggcggttac
ttcatcatcaatggctcggagaaggtcctcatcgcccaagagcgcatggcggcaaaccat
gtctacgtcttcgccaaagcccagccctcgcctataaatttcctcgccgaaattcgcagc
gccgttgagaagggtggcaagactatcagctcgttccaggtcaagatgttccaccgcaac
caggaaaagacgagcggtaacacgatcaaagccaccattccttacatcaagcaggacatt
cccatctggattgttttccgcgcgctgggcgtcatgtccgaccgcgacatcctcgagcat
atctgctacgatatgcacgacgtgacgatgttggaaatgttgaagccttgcattgacgag
ggattcgtcatccaggagcgtgagcaagcgctcagcttcattggtgtgcgtggcacgact
acaggtctgaacaaggagcggcgtctgcgctacgcgcaggagatcctgcagaaggagatg
ctgccgcacatctcgatggctgagggctctgagtcgaagaaggcgtacttcctcggatac
atgatccatcggttgctgctcgccgcccttgagcgcagagagctcgacgaccgtgatcac
tttggcaagaagcggcttgacctcgcagggcctctgctcgcgagtctcttccgcatgctg
ttccggaagttgacgaaggacgtctaccggtacctgcagaagtgcgtggaggcgcgcaag
gagttcaatttgagcctcgcggtcaaggcgaacacgatcacgaacggactgaagtattcg
ctcgcgacgggcaactggggcgaccagaagaagtcgatgagcgcgaaggccggcgtgtct
caggtgctcaaccggtatacgttcgcgtcgacgctctcgcatctccggcgcacgaacacg
ccgctcgggcgtgagggcaagatcgcgaagccgcggcagctgcataatacgcactggggc
atggtgtgccctgcggaaacgcccgagggccaggcgtgcgggctcgtgaagaacctcgcg
ctgatggcgtgcatctccgtcggctcgctctccgcgccggttatcgagttcctcgaggag
tggggcctcgagtcgctcgaggagaacgcgcactcgggtgtcccgtcgacgaaggtgttt
gtcaacggcgtgtggatgggcgtgcaccgcgaccccgccaacctcgtcaagacgatcaaa
aagctgcgccgcaaggacgacatcagccccgaggtctccgtcgtgcgcgacatccgcgag
aaggagctccgcctgtacacggacgccggccgcgtgtgccgcccgctcttcatcgtcgag
gaccagcagctcgtcataaaaaagcaccatgtcgagtggatccagaacaaggaggacgag
tcgggcgccccctataagtgggataacctgatcaagacgggtgtcatcgagctactcgac
gctgaggaagaggagaccgtcatgatctgcatgacctcggacgacctcgagaactctcgc
ctcatgagccgcggcttggcgcctcgcgacgcagataacgagttcgacccggccgcgcgt
ctgaagtctgtcgtcaatgcgcacacctggacgcactgcgagatccacccgagtatgatc
ctgggcatttgcgcgagtatcattccctttccagatcacaaccagtctccgcgtaatacc
taccagtctgccatgggcaagcaagcgatgggtatctacttgacgaacttccaagttcgt
caggatacgatggccaacatcctgtactacccgcaaaagccactcgcgacgacgcgctcg
atggagtatctgaagttccgtgaacttccagccggccagaacgccattgtcgccatcctg
tgctacagcgggtacaaccaggaagattcagtcattatgaaccagagctccatcgaccgt
ggcctcttccgctccatctactaccgcagttacatggacgtcgagaagaagtccggcatg
gttgcgctcgaggagttcgagaagcccacgcgcgacacgacgctgcgtatgaagcacggc
acctacgacaagctcgaggatgacggcctcatcgcgcccggcaccggtgttgccggcgag
gacatcatcatcggcaagactgccccgctgccgcaggacagcgaggagctcggtcagcgg
acgcgcacgcaccagaagcgcgacgtctcgacgccgttgaagagcaccgagaacggcata
gtcgaccaggtgctcatcacaacaaaccaggacggacagaagttcgtcaagattcgcatc
cgctcgacgcgcgtgcctcagatcggtgacaagttcgcgtcgcgccacggacagaagggc
acgatcggcatcacgtaccggcaggaggacatgcccttcacggcggagggcgtcacgccg
gacatcatcatcaacccgcacgccatcccgtcccgcatgaccatcgggcacttggtcgaa
tgtctgctctcgaaggtcgcgacgatgatcggcaacgagggcgacgcaacgccgttcacc
gacctcaccgtcgagtccgtgtcgcaggtgctgcgccagcgtggctaccactcgcgcggc
cttgaggtcatgtaccacggccacacgggccgcaagctgcaggcgcaggtctacctcggc
ccgacgtactaccagcgcctgaagcacatggtcgacgacaagatccactcccgcgcgcgc
gggccagtgcagatcctgacgcgccagcccgtggaaggtcgtagcagagacggtggtttg
cgattcggagagatggagcgcgattgcatgatctcgcacggtctcgccgccttcctcaag
gagcgcttgttcgacgccagcgacgcgtacagactccacgtctgcgatatttgcggcttg
actgccattgcgaacctgaaaaagcagagcttcgagtgcagagcttgcaagaacaaggtc
gctgtttcgcagctttacattccctatgccgcaaagctgttgattcaggaattgcagagc
atgaatatcgctgcccgtctatacacggtgtccacgggtcgcacgcgcgactga
DBGET
integrated database retrieval system
