Auricularia subglabra: AURDEDRAFT_111595
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Entry
AURDEDRAFT_111595 CDS
T03129
Name
(GenBank) putative rRNA pseudouridine synthase
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
adl
Auricularia subglabra
Pathway
adl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AURDEDRAFT_111595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_111595
03032 DNA replication proteins [BR:
adl03032
]
AURDEDRAFT_111595
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
AURDEDRAFT_111595
Prokaryotic type
AURDEDRAFT_111595
DNA replication proteins [BR:
adl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
AURDEDRAFT_111595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-ProteinID:
EJD52133
JGI:
111595
LinkDB
All DBs
AA seq
514 aa
AA seq
DB search
MPSELSKHAVAEAQRKGDFAVKPEPSSATPKLDTSNWPLLLKNYDKLLVRTAHFTPIPMG
CSPLKRDITSYVKSGVINLDKPSNPSSHEVVAWLRRILRVDKTGHSGTLDPKVTGCLIVC
IDRATRLVKSQQGAGKEYVCVLRLHAALPDPMALPRAMETLTGALFQRPPLISAVKRQLR
VRTIYSSTLIEFDNDRNLAVFHVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGALS
ESDEMVTMHDVLDAQWMYDNTRDESYLRRVIKPLETLLVGYKRIVVKDSAVNAVCYGAKL
MIPGLLRYEDDIALHEEVVLMTTKGEAIALAIAQMTTVELATCSHGVVAKVKRCIMERDT
YPRRWGLGPKALEKKKLIKDGKLSKFGEKIDGVTPADWSKDYVDYNRDPEASASATVAET
ADAKVTKTTVEEVEVEPKDKKRKRKSEAGDGGVEETEEERAERKRRKKEAKAAKKDEADG
DASMAVDEDDDEAERKRRKKEKKEKKEREKAEKS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcagagctgtccaagcacgccgtcgccgaggcgcagcgcaagggcgactttgcc
gtaaaacccgagccgtcgtccgcgacgcccaagctcgacacgtccaactggccgctgctc
ctcaaaaactatgacaagctgcttgtccgcaccgcccacttcacgcccatccccatggga
tgcagtcccctgaagcgcgatattactagctatgtgaagtctggtgtcattaatctcgac
aagccctcaaacccatcgtcgcacgaggtcgtcgcttggctgcgccgcatcctccgcgtc
gacaaaaccggccactccggcacgctcgaccccaaggtcactggctgcctcatcgtgtgt
attgaccgtgcaacgcgtctcgtgaagagccagcagggcgcaggcaaggaatacgtctgt
gtactgcgtctgcacgccgcgctgccggaccctatggccctcccgcgcgcaatggaaacc
cttaccggcgcgttattccagcgcccgcctctcatctctgccgtcaagcgtcaattgcgt
gtccgcaccatctacagctccacattgatagagttcgacaacgaccgcaacctcgccgtc
ttccatgtcagctgtgaagctggtacttacattcgtacattatgtgtacacttgggtctc
ttgctcggtgtcggtggccacatgcaggaactccgtcgcgtccggtccggtgcactttcc
gagagcgacgagatggtgaccatgcacgacgttctggacgcgcaatggatgtacgacaac
acgcgtgacgagtcgtacctgcggagagtaatcaagccgctagagacgctgctcgtgggc
tacaagcgcatagtcgtcaaggacagcgctgtcaacgccgtgtgctacggcgcgaagctc
atgatcccgggtctcctgcgctacgaggacgacatcgcgctgcacgaggaggtcgtgctc
atgacgaccaagggcgaggcaatcgcgctcgccatcgcgcagatgacaaccgtcgagctc
gcgacgtgctcgcatggcgtcgtcgcgaaggtcaagcgctgtatcatggagcgcgacacc
tacccgcgccgctggggcctgggaccgaaggcgctggaaaagaagaagctgatcaaggat
ggcaagctgtccaagttcggcgagaagatcgacggcgtcacgcccgcggactggtcgaag
gactacgtcgactacaaccgcgacccggaggcgagtgcgagcgcgacggtcgccgagaca
gcggacgcgaaggtgacgaagacgacggtcgaggaggtcgaggtcgagccgaaggacaag
aagcgcaagcgcaagtccgaggcgggcgacggcggcgtcgaggagaccgaggaggagcgc
gcggagcgcaaacgccggaaaaaggaggccaaggcggccaagaaggacgaggccgacggc
gacgcgagcatggcggtggacgaggacgacgatgaggccgagcggaagagacggaagaag
gagaagaaggaaaagaaagagcgggagaaggctgagaagagttag
DBGET
integrated database retrieval system
