Auricularia subglabra: AURDEDRAFT_111799
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Entry
AURDEDRAFT_111799 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
adl03015
mRNA surveillance pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_111799
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_111799
03015 mRNA surveillance pathway
AURDEDRAFT_111799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_111799
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_111799
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AURDEDRAFT_111799
TREX complex
AURDEDRAFT_111799
Spliceosome [BR:
adl03041
]
Complex C
Other components
EJC/TREX
AURDEDRAFT_111799
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AURDEDRAFT_111799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-ProteinID:
EJD51141
JGI:
111799
LinkDB
All DBs
AA seq
257 aa
AA seq
DB search
MSSALDKSLDDMIVDKKRNRAPRRGRSTRGSTGTTGAVAGATARTRYSGILPSSNGNIAA
KQAAAAAQVQSSAGAEKIIVSNLPPDVNEAQIKELFSTTVGPLKEVNLHFDQHGKSKGVA
HVQFSRKGDGTKAYNQYNHRLIDGKRPMKIEIIVDPGKAPAPPLAGRLAPAPAAVTTGGG
RRGKKGGEDNQLAGVAEAMEGVESNGGRGARGGRRGRGSRRGRGERPAKSAADLDAEMEE
YTAAPAAAAAPPAVAAA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgctcttgacaagtctctggacgacatgatcgtggacaagaaacgtaaccgt
gcgccccgccgcggccgctccacccgcggcagcactggcacgactggagctgtcgccggc
gcgactgcgcgtactcgctacagcggaatcctgccttcgagcaacggcaacatcgccgcg
aagcaagccgccgccgccgcgcaggttcagtcctccgcaggcgcggaaaagatcattgtc
tccaacctgccccccgacgtgaacgaggcacaaatcaaggaactcttctccaccaccgtc
ggcccgctcaaagaagtcaaccttcatttcgaccagcacggcaagtccaagggcgtcgcg
catgtccagttctcgcgcaagggcgacggcaccaaagcgtacaaccagtacaaccaccgc
cttatcgacgggaaacgcccgatgaagatcgaaatcatcgtcgaccccggcaaggcgcct
gccccgccgctcgctggccgcctcgctcccgcacccgccgctgtgaccactggaggagga
cgacggggcaagaagggcggtgaggacaaccagcttgctggcgttgcggaggccatggag
ggtgtcgagtccaatggtggacgtggagcacgcggaggacgtcgtgggcgcggctcgcgt
cgcggccgtggtgagcggccggcaaagagcgcggcggaccttgacgctgagatggaggag
tacactgctgcccctgccgcggccgctgcacccccggccgtcgctgctgcgtga
DBGET
integrated database retrieval system