KEGG   Auricularia subglabra: AURDEDRAFT_111799
Entry
AURDEDRAFT_111799 CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
adl  Auricularia subglabra
Pathway
adl03013  Nucleocytoplasmic transport
adl03015  mRNA surveillance pathway
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_111799
  09122 Translation
   03013 Nucleocytoplasmic transport
    AURDEDRAFT_111799
   03015 mRNA surveillance pathway
    AURDEDRAFT_111799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_111799
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_111799
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     AURDEDRAFT_111799
    TREX complex
     AURDEDRAFT_111799
Spliceosome [BR:adl03041]
 Complex C
  Other components
   EJC/TREX
    AURDEDRAFT_111799
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AURDEDRAFT_111799
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded RRM_10
Other DBs
NCBI-ProteinID: EJD51141
JGI: 111799
LinkDB
AA seq 257 aa
MSSALDKSLDDMIVDKKRNRAPRRGRSTRGSTGTTGAVAGATARTRYSGILPSSNGNIAA
KQAAAAAQVQSSAGAEKIIVSNLPPDVNEAQIKELFSTTVGPLKEVNLHFDQHGKSKGVA
HVQFSRKGDGTKAYNQYNHRLIDGKRPMKIEIIVDPGKAPAPPLAGRLAPAPAAVTTGGG
RRGKKGGEDNQLAGVAEAMEGVESNGGRGARGGRRGRGSRRGRGERPAKSAADLDAEMEE
YTAAPAAAAAPPAVAAA
NT seq 774 nt   +upstreamnt  +downstreamnt
atgtcttctgctcttgacaagtctctggacgacatgatcgtggacaagaaacgtaaccgt
gcgccccgccgcggccgctccacccgcggcagcactggcacgactggagctgtcgccggc
gcgactgcgcgtactcgctacagcggaatcctgccttcgagcaacggcaacatcgccgcg
aagcaagccgccgccgccgcgcaggttcagtcctccgcaggcgcggaaaagatcattgtc
tccaacctgccccccgacgtgaacgaggcacaaatcaaggaactcttctccaccaccgtc
ggcccgctcaaagaagtcaaccttcatttcgaccagcacggcaagtccaagggcgtcgcg
catgtccagttctcgcgcaagggcgacggcaccaaagcgtacaaccagtacaaccaccgc
cttatcgacgggaaacgcccgatgaagatcgaaatcatcgtcgaccccggcaaggcgcct
gccccgccgctcgctggccgcctcgctcccgcacccgccgctgtgaccactggaggagga
cgacggggcaagaagggcggtgaggacaaccagcttgctggcgttgcggaggccatggag
ggtgtcgagtccaatggtggacgtggagcacgcggaggacgtcgtgggcgcggctcgcgt
cgcggccgtggtgagcggccggcaaagagcgcggcggaccttgacgctgagatggaggag
tacactgctgcccctgccgcggccgctgcacccccggccgtcgctgctgcgtga

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