Auricularia subglabra: AURDEDRAFT_112887
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Entry
AURDEDRAFT_112887 CDS
T03129
Name
(GenBank) Rap30/74 interaction domain-containing protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_112887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_112887
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
AURDEDRAFT_112887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Pacs-1
Motif
Other DBs
NCBI-ProteinID:
EJD48408
JGI:
112887
LinkDB
All DBs
AA seq
680 aa
AA seq
DB search
MPPVDAMAFLRPYKREIPGKKPSAPATPAKSPGKRPRPAPKKDEADDLARPRPQGTYREF
KLMSTGRDSWKHDIFKFDSRKPVDLDAWAQPLKLNRKNPPPREGDEVVSKGPITPMLGLD
GKPVIGPDGEMVYMQDGRPIPKAKKEEDGEDEVPKPKEPTKKRKPFQKKTRQIFTIPEEQ
RQLQREERYPWVLEDNSGQETWIGRIENADKASFHGLFLTGTGSDFYFVPAHRWYKMQKR
PNFKTATMEEVEAQYARLQKNHTLEFWKKRQQQSQEAVAAAEAQGRPINLGHIVHQPSLV
RSSGGQSLASGGRRLRTVIKGDSSLFGDDDDDELKDSLRKRREKELGEEGDLDEIEYEEE
FADDDEKMNVDEEEDEEAKELEERIKRETRAANKLREAGVEEDESDEEEDFLKNLTGAGK
AVKKALRTHEKNALYDSDDEKNPYLTSEDEEEEEPTNQPTGVEPTATPTPSGSKAAKSST
PSQQQKSGSTPKAQSKAPSRATSPSVPRAKSPAAPPGSGSSLLAQRATSPKGKNVPGSSR
PTSPKPQHPGATGAGAARATSPLAGGSGSRATSPTAPSAVVKKRKVEELSSPTLPSTAVK
KVKKAVAPGATPAPPPDRKIDEAFVVEWLRAQPEPPTTMQCIGQFRPYLVDKKSKDVLTN
IIRKVAELKGGVLTLRAGFL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgtcgacgcgatggcctttctgaggccctacaagcgcgaaataccgggcaag
aagcccagcgcgcccgctacgccggccaagtcgccgggcaagcgtccgcgtcctgcgccg
aaaaaggacgaggcggatgacctggcgcgcccgcggcctcaggggacgtaccgcgagttc
aagctcatgtcgaccgggcgcgacagctggaagcacgacatattcaagttcgactcgcgc
aagcccgtcgacctcgacgcgtgggcgcagccgctcaagctgaaccgcaagaacccgcca
ccgcgcgagggcgacgaggtcgtcagcaaggggcctatcacgcccatgctcggcttggac
ggcaagcccgtcatcgggcccgacggcgaaatggtctacatgcaggacggccgcccgatt
cccaaggcgaagaaggaggaggacggcgaggacgaggtgccgaagcccaaggagcccacc
aagaagcggaagccgttccagaagaagacccgccagatattcaccatccccgaggagcag
cgccagctccagcgcgaggagcgctatccctgggtgctcgaggacaactccggccaggag
acttggatcggccgcatcgagaacgcggacaaggcgtccttccacggcctcttcctcact
ggcaccggctccgacttctactttgtccccgcccatcgctggtacaagatgcagaagcgg
cccaacttcaagactgcgacgatggaggaggtcgaggctcagtacgcgcgcctgcagaag
aaccacacgctggagttctggaagaagcgccagcagcagtcgcaggaagcagtcgccgcc
gcggaggcgcagggccgtcccatcaacctcggccacatcgtccaccagccttcgcttgtc
cgctcgtccggaggccagagtcttgcttccggcggaaggcggctgaggaccgtcatcaag
ggcgattcgagcctgtttggcgacgacgacgacgacgagctcaaggactccctccgcaag
cgtcgcgagaaggaactcggcgaggagggcgacttggacgaaatcgagtacgaagaagaa
ttcgccgatgacgacgagaagatgaacgtcgatgaggaggaggacgaggaggcgaaggaa
ctcgaggaacgcatcaagcgcgagacgcgtgccgcgaacaagttgcgggaagctggcgtt
gaagaggacgagtccgatgaagaagaggacttcctcaagaacctcactggagctgggaag
gcggtcaagaaggcgttgcgcacacacgagaagaacgcattgtacgatagcgatgacgag
aaaaacccttatttaacatcggaggatgaggaagaagaggagcccacaaaccagccgacg
ggtgtagaacctacggcaacacccactccgtccgggtcgaaggcagcgaagtccagcacg
ccgtcgcagcagcagaagtctggctcgacgcccaaggcgcagtcgaaggcgccatctcgc
gcgacctctcccagcgtgcctcgcgccaagtcgcctgctgcgccgcccggctcgggcagc
tcactcctcgcacaacgcgccaccagccccaagggaaagaacgtcccgggctcgtcccgc
ccaacgagcccgaagccgcagcacccaggcgcgactggtgcaggcgcggcacgggcgacg
tcgccgctcgctggcggcagcggcagccgcgcgacaagccccactgcgccttcagccgtc
gtcaagaagcggaaggtcgaagagctgagctcgccaacgttgccttcaaccgccgtgaag
aaagtgaagaaggccgtcgcacccggagcgacgcctgcgccgccaccggatcgcaagatc
gacgaggcgttcgttgtcgagtggttgcgtgcgcagccggagccgccgaccacgatgcag
tgcatcggccagttcaggccctacctcgtcgacaagaagtccaaggacgtgctcaccaac
atcattcggaaggtcgcggagctcaagggcggcgtgctcactctgcgcgccggtttcctg
tag
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