Auricularia subglabra: AURDEDRAFT_114005
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Entry
AURDEDRAFT_114005 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
adl
Auricularia subglabra
Pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_114005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_114005
Spliceosome [BR:
adl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AURDEDRAFT_114005
Complex C
U5 SnRNP specific factors
AURDEDRAFT_114005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
PRP6_TPR
TPR_14
HAT_PRP39_N
TPR_19
TPR_16
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
ARM_TT21_N
HAT_Syf1_CNRKL1_C
TPR_21
TPR_11
CFAP70_mid_TPR
PLU-1
CTC1_6th
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
EJD45680
JGI:
114005
LinkDB
All DBs
AA seq
932 aa
AA seq
DB search
MSAGKALPKADRLAFLSQPAPASYVAGLGRGASGFTTRSDIGPAREGPSPEAVAEAQARR
GEESEVDPDQFQDPDNEVGLFAGTVYEQDDEEADRIYDAVDARMDARRKVRREAREAEEL
AKFRAERPKIQTQFADLKRGLSAVTDEEWENLPEVGNLTKRRRKDFREGRHFAVPDSVIV
GNRESGQYENALDPMQQDQGGFVTPAESGTLTNLVELGQARDKVLSLRLDQVSGTSSTLG
GSQTSIDPKGYLTDLNSVQVRSDAEIGDIKRARMLFKSLVESNPKHAPGWIAAACVEEHA
GRMVVARKLIIEGCKQCPKSEDVWLEAARLHQTSDAKVILADAVQHLDQSVKIWLTAANL
EGDVKAKKRVLRKALEHIPNSVRLWKETVNLETSPADARILLSRAVEVIPTSVELWLALS
RLETPERAKGVINKARRAIPTSHEIYIAAARLSEQEAAEKIAAGQDATAELTRVDKTIEV
CVKELRKLQVLLTREQWLKEAERCETDGSPRTCEAIVKATVALELDEEDRLDVWMADVES
TEQRGLTGTARAILAYALRVFPDRQDLWKRAAGLEKMHGTRASLDAILARAVEHCPQAET
LWLMGAKEKWLGGDVPGAREILARAFEANAESEAIWLAAVKLEAENDEIDVARKLLVRAR
TNADTERIWMKSAVFERRHGQLDEALATLKAAIAKFPKFAKFYMIQGQILQDRKDVPGAR
AAYAAGMKACPKEPVLWILASRLEEADGRSIKARALLDKARLVNSGSDILWAEAVGVEER
AGAAQQGKVLLARGLQECAASGLLWSIAIWAEPRASRKSRSVDALKKSNESPMVVCAIAR
LFWSERKIEKAREWFARAVTKDDGGADLGDSWGWWLKFERQHGTKEHQEAVIAKCVAAEP
LHGPIWQSVAKDVKNSGKSTKEILELVAATLQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggcaaagccttgccaaaagccgaccgtcttgccttccttagccagcctgcg
cctgcctcatatgtagccggtctcggtcgtggcgcgtctgggtttacgacccggtcagat
atcggtcctgcgcgcgaaggaccctcaccagaggctgtagccgaggcgcaagcgcgtcgc
ggcgaagagtccgaagtcgacccggaccagttccaggacccggacaacgaagtcggcctc
ttcgccggcaccgtctacgagcaggacgatgaggaggccgaccggatatacgacgcggtc
gacgcgcgcatggacgcccgccgcaaggtgcggcgcgaggcgcgcgaggcagaggagctc
gccaagttccgcgcagagcggcccaaaatccagacgcagttcgccgacctcaagcgcggg
ctctccgccgttaccgacgaggagtgggagaacctgcccgaggttggcaacctcaccaag
cgccgcaggaaggacttccgcgagggccgtcacttcgccgtgcccgacagcgtcatcgtg
ggcaaccgcgagagtggccagtacgagaacgcgctcgaccccatgcagcaggaccagggt
ggcttcgtcacgcccgccgagagcggcacgctcaccaaccttgtcgagctcggccaggcg
cgcgacaaggtgctttcgttgcgcctggaccaggtcagcggcacgagttccacgctcggc
ggctcgcagacgagcatagaccccaaaggctatcttacggacctcaacagcgtacaagta
cgcagcgacgcggaaatcggcgacatcaagcgagcacgcatgctcttcaagtctctcgtc
gagtccaatccaaaacatgcgcctggctggatcgccgcggcttgcgtagaagagcacgct
ggaaggatggtcgttgcgcgcaaactcattatcgaaggctgcaaacaatgtccaaagagc
gaagacgtctggctggaggcagcacgcctacaccagacctcggacgcgaaggtcattctt
gcggacgcggtacaacacctcgaccagagtgtcaagatctggctgactgccgctaacctg
gaaggcgacgtcaaggccaagaagcgtgtcctgcgcaaggctctcgaacacattcccaat
tccgtgcgcttatggaaggagacggtcaatctggaaacctcgccggccgatgcacggatt
cttctctctcgtgccgtcgaagtcatcccaacctccgtcgaactctggcttgcgctttcc
cgcctcgaaacacccgaacgcgccaagggcgtcattaataaggcgcgcagagccatcccg
accagccatgaaatctacattgccgccgcccgactcagcgagcaagaggcggccgagaag
atcgcagccgggcaggacgcaacggcggagctgacgcgcgtggacaagacgatcgaggtc
tgcgtcaaggagctgcgcaagctgcaggtgctgctcacgcgcgagcaatggctcaaggag
gccgagcggtgcgagactgacggctcgccacgaacgtgcgaggcgatcgttaaggcgacg
gtcgcgctcgagctcgatgaggaggaccggctcgacgtctggatggcggacgtcgagagc
acggagcagcgcgggctgacgggcaccgcgcgcgcgatcctcgcgtacgcgctgcgcgtg
ttccccgaccggcaggacctgtggaagcgcgcggcgggcctcgagaagatgcacggcacc
cgcgcgtcgctcgatgcgatcctcgcgcgcgccgtcgagcactgcccgcaggccgagacg
ctctggctcatgggcgcgaaggagaagtggctcggcggcgacgtgccgggcgcgcgcgaa
atcctcgcgcgcgcgttcgaggcaaacgccgagagcgaggccatctggctcgccgcggtc
aagctcgaagcggagaacgacgagatcgacgtcgcgcgcaagttgcttgtgcgcgcgcgc
acgaacgccgacaccgagcgcatctggatgaagtccgccgtcttcgagcgtcgccacggc
cagctcgacgaggcgctcgcgacgctcaaggccgcgatcgccaagttccccaagttcgcg
aagttctacatgatccaggggcagatcctgcaggatcgcaaagacgtgcccggggcacgc
gcggcgtacgcggccggcatgaaggcgtgcccgaaggagcccgtgctgtggatcctcgca
agccggctcgaggaggccgacgggcgcagcatcaaggcgcgcgcgctgctcgacaaggcg
cgcctggtgaactccgggtccgacatcctgtgggccgaggccgtcggcgtcgaggagcgc
gcgggcgctgcgcagcaaggcaaggtgctgctcgcgcgcggcctgcaggagtgcgcggcg
agcgggctgctgtggagcattgcaatttgggctgaaccgcgcgcgtcgcgcaagagccgc
tccgtcgacgcgctcaagaagagcaacgagagcccaatggtcgtatgcgccatcgcgcgc
ctgttctggtccgagcgcaagatcgagaaggcgcgcgagtggtttgcacgcgcggtcacg
aaggacgacggcggtgccgacctgggcgactcctggggctggtggctcaagttcgagcga
cagcatggcacgaaggagcaccaagaagccgtcattgccaagtgcgtggccgctgaacct
ttacacggtcctatatggcaatccgttgcgaaggatgtgaagaactccggaaagagtaca
aaggaaatcttggagcttgtagctgcaacgttgcagtag
DBGET
integrated database retrieval system
