KEGG   Auricularia subglabra: AURDEDRAFT_115438
Entry
AURDEDRAFT_115438 CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
adl  Auricularia subglabra
Pathway
adl03020  RNA polymerase
adl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AURDEDRAFT_115438
  09124 Replication and repair
   03420 Nucleotide excision repair
    AURDEDRAFT_115438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adl03021]
    AURDEDRAFT_115438
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_115438
Transcription machinery [BR:adl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     AURDEDRAFT_115438
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AURDEDRAFT_115438
SSDB
Motif
Pfam: RNA_pol_Rpb4 Dicer_dsRBD
Other DBs
NCBI-ProteinID: EJD41528
JGI: 115438
LinkDB
AA seq 135 aa
MATPRLQRRTQTEEEDAASLKLGAEFNNAGCLLISEVKLLLDHRRDNAPDTAVYNKTLEY
VKTFAKFSTAESASAVRETLRREPQLTQFETAQLANLVPADVDEAKSIVPSLVKIDDDRL
QSLLDEVQTLRKFQT
NT seq 408 nt   +upstreamnt  +downstreamnt
atggccacaccaagattacaacggcgcacgcagaccgaggaagaagacgcggcgtcgctg
aagctcggcgccgagttcaataacgccggctgcctgctcatttccgaggtcaagctgctg
ctcgaccaccggcgcgacaacgcgccagacactgcagtgtacaataagacgctcgaatat
gtcaagacgttcgccaaattcagcacggccgaaagcgccagcgccgttcgcgagacactg
cggcgagaaccgcaactgacccaattcgagacggcccaactagccaacctcgtccccgcc
gacgtggacgaggcaaaaagcatcgtgcccagtctcgtgaaaatcgacgacgaccgcctg
cagagcctgctcgacgaggtgcagacgcttcgcaaattccagacgtaa

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