KEGG   Auricularia subglabra: AURDEDRAFT_115695
Entry
AURDEDRAFT_115695 CDS       T03129                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K14004  protein transport protein SEC13
Organism
adl  Auricularia subglabra
Pathway
adl03013  Nucleocytoplasmic transport
adl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AURDEDRAFT_115695
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AURDEDRAFT_115695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_115695
   04131 Membrane trafficking [BR:adl04131]
    AURDEDRAFT_115695
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AURDEDRAFT_115695
Membrane trafficking [BR:adl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    AURDEDRAFT_115695
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    AURDEDRAFT_115695
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    AURDEDRAFT_115695
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP EIF3I Beta-prop_EML Beta-prop_ACSF4
Other DBs
NCBI-ProteinID: EJD40822
JGI: 115695
UniProt: J0WWP1
LinkDB
AA seq 324 aa
MVNAQPKSSVAIETHHEDMIHDSQLDYHGKRLATCSSDRTIKVFDVVDGEPKSTGHTLKG
HTGPVWQVAWAHPKFGNILASCAYDGKVYIWKEQGAAWQRIKEHSLHTASVNSVSWAPHE
LGALVACASSDGRLSVLSFKNDGQWGADIFTGHAIGCNAVSWAPAVLPGSLIVPTPGAPT
VPGQGGTAPLPTVKRFASAGCDNLVKIWGFREDTQSWVEEEVLEGHTDWVRDVAWAPNIG
LPRSYIATASQDKTVLVWTKDAPNAAWQKTALDGGNGGRFPDVVWRVSWSLAGNILAVSC
GDGKVTLWKENLRGVWECVSEMNA
NT seq 975 nt   +upstreamnt  +downstreamnt
atggtcaatgcacagccaaagtcgtctgtggctatcgagacgcaccatgaagacatgatc
catgattcccaactcgactaccacggcaagcggctggccacttgctctagcgaccgcacc
attaaggtcttcgacgtcgtcgacggcgagcccaagagcactgggcacactctgaagggc
cacacgggccctgtttggcaggttgcctgggcgcaccccaagtttggcaacatcctcgct
agttgcgcgtacgacggcaaggtttacatctggaaggaacaaggcgcagcctggcagcgc
attaaggagcactcgctgcataccgcatcggtcaactcggtctcctgggcgcctcacgag
ctcggtgcccttgtcgcttgcgcgtccagcgatggtcgtctttcggttctgtcgttcaag
aacgatggtcaatggggcgcagacatcttcacgggccatgcaatcgggtgcaacgctgtt
tcgtgggccccagctgttctgcccggctcgctcattgtaccaacgcctggcgccccgact
gtcccggggcagggcggaactgcacccctcccgacagtcaaacgcttcgccagcgccggt
tgcgacaaccttgtcaagatctggggcttccgggaagacactcaatcttgggtcgaggag
gaagtcctcgagggccacactgactgggtacgcgacgttgcatgggcgcccaacattgga
ctgccgcggtcctacatcgcgacggcgtctcaggacaagacggtccttgtatggaccaag
gacgcccccaacgccgcctggcaaaagactgccctggatggcggtaacggcggtcgcttc
ccggacgtcgtttggcgcgtgtcctggagccttgccggcaacatccttgccgtcagctgt
ggcgacggcaaggtcactttgtggaaggagaacttgcgcggcgtgtgggagtgtgtaagt
gaaatgaatgcataa

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