Auricularia subglabra: AURDEDRAFT_117141
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Entry
AURDEDRAFT_117141 CDS
T03129
Name
(GenBank) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_117141
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_117141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_117141
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_117141
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_117141
mRNA degradation factors
5'-3' decay
Lsm complex
AURDEDRAFT_117141
Spliceosome [BR:
adl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AURDEDRAFT_117141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EJD36188
JGI:
117141
LinkDB
All DBs
AA seq
116 aa
AA seq
DB search
MDKARGAARGAGPKRGGGPGGSAAGDKPKREAILDLSKYQNERIRVKFTGGREVTGILKG
YDQLLNLVLDDVEEVIQEPEPRTRKLGLAVLRGPTVTLLSPVDGAEEIANPFAGQE
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggctcgcggagcggcgcgtggcgcaggcccaaaacgcggtggcggcccaggc
gggtccgcggccggcgataagcccaaacgcgaggccatcctcgacctttccaagtaccaa
aacgaaaggatacgcgtcaagttcacgggcggcagagaagtcacgggcattctgaagggc
tatgaccagctccttaatctcgtattggacgacgtcgaggaggtcatccaagagcccgaa
ccccgtactcgcaaacttggccttgctgttctccgggggcccactgtcacgttgctcagc
ccagtcgacggtgctgaagaaatcgctaacccctttgcgggccaggagtag
DBGET
integrated database retrieval system
