Auricularia subglabra: AURDEDRAFT_117521
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Entry
AURDEDRAFT_117521 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_117521
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_117521
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
Pre-60S particles
Helicases
AURDEDRAFT_117521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OCRL_clath_bd
Motif
Other DBs
NCBI-ProteinID:
EJD34901
JGI:
117521
UniProt:
J0CWE4
LinkDB
All DBs
AA seq
521 aa
AA seq
DB search
MLVPTRELAEQVSNLLKGLLKYCDKDLTFVNVAAGSTSHLKSILADSPDIVISTPARALS
LLQSKVLTLALMESLVIDEADLILSYGHDEDMKQILGGGFFPSVYQSYLMSATMTKDVET
LKGLVLRSPAILRLEEDEDVAANLSQYAVRCNEVDKFLLTYVMLKLKLVKGKCLVFVNDV
DRCYRLKLFLEQFSIKSCVLNSELPLNSRFHIVQEFNKGVYDYIIATDESGEKAEADSDA
ESESEAEAEDEDEADPDMLPTQRPAEGEAPPKKTLKRKRGTPPPPLTQKKRQKKAGDREY
GVSRGVDFVDVACVLNFDLPSSARAYTHRVGRTARAGKSGMALAFVVPKDEFGKNKVVGG
VPSTKRDEKVFKRIEEDQAARGSKIAEYAFDMKQVNSFRYRMDDALRAVTRAAIKEARVK
ELKSEILNSDKLKAHFEDNPLDLEYLRHDKALHPTRVQPHMKHVPKYLMPRIAAVPGAAQ
ADEVGFVPFKKDGASRGRGRGGKSARGGGRKKNDPLKKFGR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtccccacgcgcgagcttgcagaacaggtctcgaatctgctcaaaggcctcctc
aaatactgcgacaaggatctcaccttcgtgaacgtcgccgcaggcagcacatcgcatctc
aagtccattttggcagatagcccggatatagtaatatcaacgcccgcgcgggcactgtcg
ttattacagtctaaggttctgaccctcgcgttaatggagtccctcgtcatcgacgaggct
gacctcatattgtcgtatggccacgacgaggacatgaaacagatactcggcggtggtttc
ttcccctcggtttatcaatcgtacctcatgagcgcgacaatgaccaaggacgtcgagacg
ctcaagggtctggtccttcgcagtccggcgatcttgcggctagaagaggacgaagacgtt
gctgccaatctcagtcaatatgccgtccggtgcaatgaagtcgacaaattcctgctcacc
tatgtgatgctcaagttgaagctcgtcaagggcaaatgcctcgtctttgtgaacgatgtc
gaccgctgctaccgcctcaagctattcctcgagcagttctccataaagagctgcgtgctg
aactcggaattgccgttaaattctcggttccacattgtccaggagttcaacaagggcgtt
tatgattatatcatcgccaccgacgagagcggggagaaggcagaggcggactcggacgcc
gaatccgagtctgaggctgaggccgaggacgaggacgaggcggaccctgacatgctccca
acacaacgacccgcggaaggcgaagccccgcccaaaaagaccctcaagcggaaacgcgga
acgccgccgccgccgctgacgcagaagaagcggcaaaagaaagcaggggaccgcgagtac
ggcgtgtcgcgcggcgtggactttgtggacgtcgcgtgcgtgctcaacttcgacctgccg
tcgtccgcccgcgcatacacgcaccgcgtcgggcgcacggcgcgcgcgggcaagagcggg
atggcgctggcgttcgtcgtcccgaaggacgagttcgggaagaacaaggtcgtcggcggc
gtgccgagcacgaagcgcgacgagaaggtgttcaaacgcatagaggaggaccaggcggcg
cgcgggagcaagatcgccgagtacgcgttcgacatgaagcaggtcaactcgttccggtac
cgcatggacgacgctttgcgcgctgtgacccgcgccgcgatcaaggaggcgcgcgtcaag
gagctcaagagcgagatcctgaactcggacaagctgaaggcgcacttcgaagacaacccc
cttgacctggagtacctgcggcacgacaaggcactgcacccgacacgggtccagccgcac
atgaagcatgtccccaagtacctgatgccgcgcatagcggccgtccctggcgcggcgcag
gcggacgaggtcgggtttgtgccctttaagaaggatggtgcgtcgcgcggacgcggacgc
ggcgggaagagcgcgcgtggcggcgggaggaagaagaatgacccactgaaaaagttcggg
cggtag
DBGET
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