Auricularia subglabra: AURDEDRAFT_117951
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Entry
AURDEDRAFT_117951 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_117951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_117951
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
AURDEDRAFT_117951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Pacs-1
Motif
Other DBs
NCBI-ProteinID:
EJD32975
JGI:
117951
UniProt:
J0WME7
LinkDB
All DBs
AA seq
584 aa
AA seq
DB search
CRVLPPREGDEVVSKGPITPMLGLDGKPVIGPDGEMVYMQDGRPIPKAKKEEDGEDEVPK
PKEPTKKRKPFQKKTRQIFTIPEEQRQLQREERYPWVLEDNSGQETWIGRIENADKASFH
GLFLTGTGSDFYFVPAHRWYKMQKRPNFKTATMEEVEAQYARLQKNHTLEFWKKRQQQSQ
EAVAAAEAQGRPINLGHIVHQPSLVRSSGGQSLASGGRRLRTVIKGDSSLFGDGDDDELK
DSLRKRREKELGEEGDLDEIEYEEEFADDDEKMNVDEEDEEAKELEERIKRETRAANKLR
EAGVEEDESDEEEDFLKNLTGAGKAVKKALRTHEKNALYDSDDEKNPYLTSDEEEEEPPT
NQPTGVEPTATPTPSGSKAAKSSTPSQQQKSGSTPKAQSKTPSRATSPSVPRAKSPAAPP
GSGSSLLAQRATSPKGKNVPGSSCPTSPKPQHPGATGAGAARATSPLAGGSGSRATSPTA
PSGLVKKRKVEELSSPTVPSSAVKKAKKTVAPGATPAPPPDRKIDEAFVVEWLRAQPERP
TTMQCIGQFRPYLVDKKSKDVLTNIIRKVAELKGGVLTLRAGFL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
tgccgcgtgctgccaccgcgcgagggcgacgaggtcgtcagcaaggggcctatcacgccc
atgctcggcttggacggcaagcccgtcatcgggcccgacggcgaaatggtctacatgcag
gacggccgcccgattcccaaggcgaagaaggaggaggacggcgaggacgaggtgcccaag
cccaaggagcccaccaagaagcggaagccgttccagaagaagacccgccagatattcacc
atccccgaggagcagcgccagctccagcgcgaggagcgctatccctgggtgctcgaggac
aactccggccaggagacttggatcggccgcatcgagaacgcggacaaggcgtccttccac
ggcctcttcctcactggcaccggctccgacttctactttgtccccgcccatcgctggtac
aagatgcagaagcggcccaacttcaagacagcgaccatggaagaggtcgaggctcagtac
gcgcgcctgcagaagaaccacacgctcgagttctggaagaagcgccagcagcagtcgcag
gaggcagtcgccgccgcggaggcgcagggccgtcccatcaacctcggccacattgtccac
cagccttcgctcgtccgctcgtccggtggccagagtctcgcttccggcggaaggcggctg
aggaccgtcatcaagggcgattcgagcctgtttggcgacggtgacgacgacgagctcaag
gactcccttcgcaagcgacgcgagaaggaacttggcgaggagggcgacttggacgaaatc
gagtacgaagaagaattcgccgatgacgacgagaagatgaacgtcgatgaggaggacgag
gaagcgaaggaacttgaggagcgtatcaagcgcgagacgcgtgccgcgaacaagttgcgg
gaagctggcgttgaagaggacgagtccgatgaagaagaggacttcctcaagaatctcact
ggagctgggaaggcggtcaagaaggcgttgcgcacacacgagaagaacgcattgtacgat
agcgatgacgagaagaacccttatttaacttcggatgaggaagaagaggagccgcccaca
aaccagccgacgggcgtagaacctacggcaacacccactccgtccggatcgaaggcagcg
aagtccagcacgccgtcgcagcagcagaagtccggctcgacgcccaaggcgcagtcgaag
acgccatctcgcgcgacctctcccagcgtacctcgcgccaagtcgcctgctgcgccgccc
ggctcgggcagctcactcctcgcacaacgcgccaccagccccaagggaaagaatgtcccg
ggctcgtcctgcccaacgagcccgaagccgcagcacccaggcgcgactggtgcaggcgcg
gcacgggcgacgtcgccgctcgctggcggcagcggcagccgtgcgacgagcccgaccgcg
ccgtcgggtctcgtcaagaagcggaaggtcgaagagctgagctcgccaacggtgccttca
agcgccgtgaagaaagcgaagaagaccgtcgcacccggagcgacgcctgcgccgccaccg
gatcgcaagatcgacgaggcgttcgttgtggagtggttgcgtgcgcagccggagcggccg
accacgatgcagtgcatcggccagttcaggccttacctcgtcgataagaagtcgaaggat
gtgctcaccaacatcatccgcaaggtcgccgagctcaagggtggcgtgctcactctgcgc
gccggtttcctgtag
DBGET
integrated database retrieval system