Auricularia subglabra: AURDEDRAFT_123069
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Entry
AURDEDRAFT_123069 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_123069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_123069
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_123069
mRNA degradation factors
5'-3' decay
Decapping complex
AURDEDRAFT_123069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
W2
Motif
Other DBs
NCBI-ProteinID:
EJD48310
JGI:
123069
LinkDB
All DBs
AA seq
406 aa
AA seq
DB search
MDEQQRAAILNEAQRKIMQTEQLEEKRRRRVIKMQRMSKYNDLMTQSDKDFITRIQVSQL
VTEDPFVEDYYAQVYSAHFRQNGGEERILKLGSGGVGLGMPGTRAGRRENAMQRMQQQVE
RIVKHAQQRDKGKATNALHYLQGALGKTAGRSYKAAPRQLLQVDNAGNGSSSPKKTAGHI
SKEDAEDPAKNPAVLNAFNEQTTEQLAPLKPLDRHQLLIYIENLITKFLDVELLRRRINA
DGAQELVEEVENLADRIYKDLHIVVPLEASEPHPFIALLGPAKGKRMFPRFPATFDSGQL
TNVITLLLATFYQLDVVQNAALLDTLEDSPQKAEVKRQTQVFQECVIQTIGRILATAPLG
MVAGLLRVLVSRNVTTSKLRAHLILQASGLNQPDGPTPDEVQARSR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagcagcgcgccgcgatcctcaacgaggcgcagcgcaagatcatgcagacc
gagcagctcgaagagaagcgccggcggcgcgtcatcaagatgcagcgcatgtccaagtac
aacgacctcatgacgcagtccgacaaggacttcatcacgcgcatccaggtctcgcagctc
gtcaccgaggacccgttcgtcgaggactactatgcccaggtgtacagcgcccatttccgc
cagaacggcggcgaggagcggatcctgaagctcggctccggcggcgtcggcctcgggatg
cccggtacgcgcgcggggcggcgcgagaatgccatgcagcgcatgcagcagcaagtggag
cgcattgtcaagcacgcgcagcaacgcgacaaggggaaggcgacgaacgcgctccactac
ctccagggcgcgcttggcaagaccgccggtcgcagttacaaggctgctccccgccagctc
cttcaggtcgacaatgccgggaacggctcttcatcgccgaagaagacggcaggccacatc
tcgaaggaggatgcggaggatccggcgaagaaccccgccgtcctcaacgctttcaacgag
cagactaccgagcaactggctccgctgaagccattggatcgccaccagctgctcatctat
atcgaaaacctgatcaccaagttcttggacgtcgagctgttgcgtcgtcgcatcaatgcg
gacggcgcgcaggaactcgtcgaggaggttgaaaacctggctgacagaatctacaaggac
ttgcacatcgtggtcccattggaggcgagtgaaccgcacccgttcatcgcgttactcggc
cccgcgaagggaaagcgcatgttcccgcgcttcccggccacgttcgacagcgggcagctg
acaaacgtcatcacgctcctgcttgcgacgttctaccagctcgacgtcgttcagaacgcg
gccttgctggacacgctcgaggactcgccgcagaaggccgaggtcaagcgtcagacgcag
gtgtttcaggagtgcgtcatccagaccatcgggcgcatcctcgccaccgcgccgcttggc
atggtcgccggcctgctgcgcgtgctcgtgtcgcgcaatgtcacaacttctaaattgcgc
gcgcacctcatcctgcaggccagcgggctcaaccagcctgacggcccgacgcccgacgag
gtgcaggcccggtcgcggtga
DBGET
integrated database retrieval system
