Auricularia subglabra: AURDEDRAFT_124757
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Entry
AURDEDRAFT_124757 CDS
T03129
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adl03016
]
AURDEDRAFT_124757
Enzymes [BR:
adl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AURDEDRAFT_124757
Transfer RNA biogenesis [BR:
adl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURDEDRAFT_124757
Prokaryotic type
AURDEDRAFT_124757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
EJD45393
JGI:
124757
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MTVVESPKPLIGTSRLFATDAERSQAAKAKGKKTDSTRSAGWDARSARRRRISSGRKRRD
EEAREYRTTCLLGCETDSYDSEGAVSRTASWAGVTRERIEGALERFRGGIVQTPPIFSAL
KMDGMPLYEYARKGIPLPRPVEGRRVTVHELALEDWHEPGAHSYKFPEKVLSKEGREKAH
AAFAKAEVDPVTVPEGGDELAEVAPGPTFTLRMRVSGGTYVRSIVHDVGRAVGSAAHVVT
LTRTRQAAYALEPRPNENTGEEEEHPTVRWDVFERAIEKRKVGEDLERDADGWAEWERVV
RDALTMVEERRKVVK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgtggagtcgcccaagccgctcatcgggacctcgcggctgtttgcaacggac
gccgagcgcagccaggctgcgaaagcaaagggaaagaagactgattcaacgcgttcggca
gggtgggacgctcgatccgctcgcagacggcgtattagttctgggcgtaaacgaagggac
gaagaagctcgggaataccgcacgacgtgtctcctgggctgcgagacagactcatacgac
tccgagggcgccgtcagccgcaccgcgtcctgggccggcgtcacgcgcgagcgcatcgag
ggcgcactcgagcgcttccgcggcgggatcgtgcagactccgccaatattcagcgcgctc
aagatggacggcatgccgctgtacgagtacgcgcgcaagggcatcccgcttccccgcccg
gtggaagggcggcgcgtgacggtgcacgagctcgcgctggaggactggcatgagcccggc
gcgcattcatacaagtttcccgagaaggtgctgagtaaggaggggcgcgagaaggcgcac
gcggccttcgccaaagccgaggtcgaccccgtaacggtacccgagggcggggacgagctg
gcggaggtcgcgcccggcccgacgttcacgctgcgcatgcgcgtcagcggcgggacgtac
gtacgcagcatcgtgcacgatgtcgggcgcgcggtgggcagcgccgcgcacgtcgtcacg
ctcacgcgcacgcggcaagctgcttatgcgctcgagcctcgaccaaatgagaacacggga
gaagaggaggaacatccgaccgttcggtgggacgtcttcgagcgtgcaattgaaaagcgc
aaggtgggcgaggacttggagcgggacgccgacggctgggctgaatgggagcgcgttgtt
cgcgacgcattgacgatggtcgaagaacggcgcaaggttgtaaagtag
DBGET
integrated database retrieval system
