Auricularia subglabra: AURDEDRAFT_132652
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Entry
AURDEDRAFT_132652 CDS
T03129
Name
(GenBank) WD repeat-containing protein 61
KO
K12602
WD repeat-containing protein 61
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_132652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_132652
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
AURDEDRAFT_132652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
PD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR11_2nd
Peptidase_S9_N
Beta-prop_DCAF12
Beta-prop_TEP1_C
Ge1_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-ProteinID:
EJD55536
JGI:
132652
LinkDB
All DBs
AA seq
320 aa
AA seq
DB search
MSIPFLQESTPSQPHTDSIWATHWAANDTVFSAAADGQIVQWSADGKPMHTQPPHTLGLV
SLSVSESGQLALYNTIEGITCLWDTANAHTVHKHESFLRTGSDATEPAWSVSIHPKGSVY
AATGGSGNVTLHSASPDSFGRVQKTLSPGRAKFGMFVAFSPDGQRVAYSTEAGQIYIFDT
EQGALSATYSSHAVCVRGFAWSHDSQLLLSASDDKRLVLHDVRTSSVGKPGSGAVASLNG
HTSWVLSASFSPDGRLAASGSADKTVRVWDIAARAPVSTIQEQGEVWSVSWRPRPGTGPG
SFVAGTEDGMVKWWKGAGSA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcccgttccttcaagaatcgacgcccagtcagccccacaccgactcgatatgg
gcaacccattgggcagccaacgacaccgtcttctccgcagcggcagacggccagatcgtc
caatggtccgccgacggcaagcccatgcatacccaacctccccataccctcggcctcgtc
tccctatcggtttcagagtctggccagctcgcactgtacaatacgatagagggaatcacc
tgcctatgggacacggccaacgcccatacagtccacaagcacgagtcgttcctgcgcact
ggcagcgacgcgactgaacccgcctggtccgtatctatacatcccaagggctcggtatac
gctgccaccgggggctcggggaacgtcacgcttcattccgcgtcgccagactcgttcggg
cgcgtgcaaaagacgctctcgccgggacgcgccaagttcggcatgtttgtcgccttcagc
ccggacggccagcgcgtcgcgtactcgaccgaggccggtcagatctacatcttcgacacc
gagcagggcgcgctctccgcgacctactcgtcgcatgccgtgtgcgtgcgcggcttcgca
tggtcgcacgattcgcagctcctgctatccgcctccgacgacaagcgcctcgtgctgcac
gacgtgcgcacgtcgtccgtcggcaagcccggctccggcgcagtcgcgtcgctcaacggc
catacgtcctgggtgctcagcgcaagcttctcgcccgacggccgcctcgccgcatcaggc
tcggcagacaagaccgtgcgcgtgtgggatattgcggcgcgtgcaccggtgtcgactatt
caggagcagggcgaagtgtggagtgtgtcctggcgcccgcgccccgggacggggcccggc
tccttcgtcgcgggcacagaggacggcatggtgaagtggtggaaaggcgcaggtagcgct
tag
DBGET
integrated database retrieval system