Auricularia subglabra: AURDEDRAFT_133561
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Entry
AURDEDRAFT_133561 CDS
T03129
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
adl
Auricularia subglabra
Pathway
adl00040
Pentose and glucuronate interconversions
adl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AURDEDRAFT_133561
Enzymes [BR:
adl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AURDEDRAFT_133561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
EJD53916
JGI:
133561
LinkDB
All DBs
AA seq
305 aa
AA seq
DB search
MKFNLAFLAFAAFAIKRASVSDVATVGYATLNGGTSGGSGGTTTTVNSLSALTSAVSGGA
KKIVIISGTISGNTVVKVGSNTTVIGQKGSSLVGVGLRVLNEKNVILRNVKISKVLAEAG
DAIGIQASSQVWVDHADLSSDRDHDKDFYDGLLDITHGCTGVTVTNSKLYNHWKASLVGH
SDSNGSEGAVTYANNYWSNLNSRTPSFRFGHGHLFNNFFEGNGDGINTRDGAQLLVENNV
WSSGNKKPLYSTDEGFAVAKGNDFGGGSNSAPTGNFNSAPYSYSLLATSSVQSSVTSGAG
QTLSF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaacctcgccttcctcgcctttgctgccttcgccatcaaacgcgcctcggtc
tccgatgtcgctaccgttggatacgccaccctcaacggcggcaccagcggcggcagcggc
ggaacgacgacgacggttaacagcctctccgcgcttacctctgctgtcagcggcggcgcg
aaaaagatcgtaatcatcagcggcacgatctccggtaacacggtggtcaaggtcggctcc
aacacgactgtcatcggccagaagggctcttcactcgttggtgtcggcctgcgggttctg
aacgaaaagaacgtcatcctgcgcaacgtgaagatcagcaaggttcttgccgaagctggc
gatgccatcggcatccaggcttcctcgcaggtatgggtcgaccacgccgacctcagcagc
gaccgcgaccacgacaaggacttctacgacggtctcttggacatcactcacggttgcact
ggggtaaccgtcaccaacagcaagctttacaaccactggaaggcgtctctcgtcggccac
tccgacagcaacggttccgagggcgccgtcacctacgcaaacaactactggagcaatctg
aactcgcgcaccccttcgttccgcttcggccatggtcaccttttcaacaacttcttcgaa
gggaacggtgacggcatcaacacccgcgacggcgcgcagctcttggtcgagaacaacgtc
tggagtagcggaaacaagaagccgctctactcgaccgacgagggcttcgctgtggctaag
ggcaacgacttcggcggaggctccaactctgccccgacgggcaacttcaactcggcaccc
tattcgtacagcctgctcgcgacctccagcgttcagtccagcgtcacctctggtgctggc
cagaccctgtccttctga
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