Auricularia subglabra: AURDEDRAFT_134122
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Entry
AURDEDRAFT_134122 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
adl
Auricularia subglabra
Pathway
adl04111
Cell cycle - yeast
adl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AURDEDRAFT_134122
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
AURDEDRAFT_134122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
adl04121
]
AURDEDRAFT_134122
Ubiquitin system [BR:
adl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
AURDEDRAFT_134122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_SCAP
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR75_1st
F-box-like
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
F-box
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Peptidase_C41
Beta-prop_Vps41
Motif
Other DBs
NCBI-ProteinID:
EJD53375
JGI:
134122
LinkDB
All DBs
AA seq
680 aa
AA seq
DB search
MDPPASPVRATNYDCDTIPPPQKAIARRESLSPAPGPDTVNSAQFDVPEYDTEPEAAQGD
VQQPAASQNATPQPPARKLCVRHQRMADEGTIVKLQASLDTLPVEERQTVSNIWSQFSSS
SHPRRELILRGILTMCCFSQLSLLSEQLINLIRLDPFSRFPREVSLKVLGHLDAISLGRA
AQVNRHWRSLADDNVLWKSICEQHIDKQCRKCGWGLPLLERRRAGHGARPPMPLSPTPSG
SSVTLDSLKRAHDEHDHGPPPKRQKTASPPPAASRAASAERSRSPTPAPAPSGSVSPPAT
TRPWKDIYCERLTIARNWRRGRHTVRTLKGHGDSVMCLQFGEAVSHVPYPMLITGSYDRT
VRVWNMDTGEEVRCLRGHTRAIRALQFDDAKLITGSMDCTLRVWDWRTGRCIRTLHGHSE
GVVCLRFDSNVLASGSVDTTVKIWNFRTGECFTLRGHKDWVNAVQLWHLPGSSALGSSCG
SSVPASSEGGFDIDPGKMLFSASDDCTIRLWDLSRKTCVRQFVGHVGQVQTLLLLNADDC
QPAEGHDGGADTPADSAHVPHLEAHRTGDGENALVPPGTRLPQLVSGSLDNTIKTWDIET
GMATQTLFGHIEGVWSVVGDRLRLASGSHDKTIKVWQREDGAPPLNLVGHEGPVTCLALS
DDKIVSGSDDHTIKIWSFSA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggacccccctgcgtcgcctgtgcgcgcgacaaactacgactgcgacaccattccaccg
ccgcagaaagcgattgcgaggcgcgagtcgctctcgccggccccgggcccggacacggtt
aattctgcccagttcgatgttccggaatacgacaccgagcccgaggccgcccagggcgac
gtgcagcagcctgcggcgagccagaacgcgacgccgcagcccccggcgcgcaagctgtgc
gtgagacaccagcgcatggccgacgagggcacgatcgtgaagctgcaagcctcgctggac
acgctgcccgttgaggagcggcagaccgtgagcaacatctggtcgcagttcagctcgtcg
tcgcatccccggcgcgagctgatcctgcgcggcatcctcactatgtgctgcttctcgcag
ctgtccctgctgtccgagcagctcatcaacctcatccgcctcgaccccttctcgcgcttc
ccgcgcgaggtttcgctgaaggtgctcggccacctcgacgccatttcgcttggccgtgca
gcacaggtcaaccggcactggcgctcgctcgcggacgacaacgtgctgtggaagagcatc
tgcgagcagcacatcgacaagcagtgtcgtaaatgtgggtggggcctcccgctgcttgag
cggcggcgcgcggggcacggcgcccggccgccgatgccgctctcgcccacaccatctggc
tcgtccgtcacgctagactcgctcaagcgcgcgcacgacgagcacgaccacggcccgccg
cccaagcgccagaagacggcgtcgcccccgccggcggcctcgcgtgccgcgtccgcggag
cgctcccgctcgccgacgcctgcacccgcgccaagcggctccgtctcgccgcccgcgacg
acgcgcccgtggaaggacatctactgcgaacgcctcaccatcgcgcgcaactggcgccgc
ggccggcacaccgtgcgcacgctcaagggccacggcgacagcgtcatgtgtctgcagttt
ggcgaggccgtgtcgcacgtgccgtaccccatgctcatcactgggtcatacgaccgcacg
gtgcgcgtctggaacatggacactggcgaggaggtgcgatgtctgcgcgggcacacgcgg
gccattcgcgcgctgcagttcgacgacgccaagctcattacgggctctatggactgtacg
ctccgcgtctgggattggcggacagggcggtgtatccgcacactccacggtcactcagag
ggtgtggtctgtctgcgcttcgactcgaatgtgcttgcgagcgggagcgtcgacacgaca
gtgaagatctggaacttccgcacaggcgagtgtttcactctccgtgggcacaaggactgg
gtcaacgccgtgcaactttggcatctgcctggctcctccgcgctcggttccagctgcggc
agcagcgtgcccgccagctcggaaggagggttcgatatcgacccgggcaagatgctcttc
tctgcgtcggatgactgcacgatccggctctgggacctgtcgcgcaagacgtgcgtgcgg
cagttcgtcggacacgtcggccaggtccagactctgcttctgctcaacgcggacgactgt
cagccagcggagggacacgacggcggtgcggacacacccgcagacagcgcacacgtccca
catctggaggcgcaccggacgggcgacggtgagaacgccctggtgccacctggaacgcgg
cttccgcagctcgtctcgggcagcttggataacacaatcaagacgtgggacatcgagacg
ggcatggctacgcagacgctcttcggccacatcgagggtgtttggtccgtcgtgggcgac
aggctccgtctcgcgtctggcagccacgacaagactatcaaggtctggcagcgcgaagac
ggtgcgccgccgctgaatcttgtcgggcacgaagggcccgtgacgtgtcttgccctctcg
gacgacaagattgtttcgggcagcgacgaccataccattaagatatggagcttctcagcc
tga
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