Auricularia subglabra: AURDEDRAFT_137997
Help
Entry
AURDEDRAFT_137997 CDS
T03129
Name
(GenBank) exo-rhamnogalacturonase B
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
adl
Auricularia subglabra
Pathway
adl00040
Pentose and glucuronate interconversions
adl01100
Metabolic pathways
Module
adl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AURDEDRAFT_137997
Enzymes [BR:
adl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
AURDEDRAFT_137997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
EJD43320
JGI:
137997
LinkDB
All DBs
AA seq
435 aa
AA seq
DB search
MLRVFLTLLIPAVAVIRSTATPAVATPESAYWRDQARLQLRRLCVVFPDCDGGDDAPAIT
RALNHDCRKKGLVVLPGPQYKIATLMNTTAMDDVVIHQFGKFLWTPDIDYWLSVSEEVGF
QNQSSVWFFGGDRVTWDGHGDATLDGNGQVWYNWARGRGNLPHRPMMINFRGLNNSVVRG
VNFFQTQMWTMALMWSNNVIMEDIYVNNTSTRPGEAHPLNTDGFDSLYSDNITLRRWKIK
SGDDAIALKGNSTNFFVEDIEIWGGQGFAVGSIGQYNGVYEVVENFFVRNVTLHNANYVL
YLKSWPGKQYGYPPNGGGGGYGHGRNVVFEDIKIDQGRSQPFYVIQCENYEGHSGEDCDS
SKFHFLDVTWRNVKGTVNSNVERASYFICSEAAGGCTNFTVADFDVRPVGKDAILSKWSC
HNVNANNGFECNDLF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgtcttcttgaccttgttgatccccgcggtcgctgtcatccgctcgacggcc
acgccagcagtcgccacaccagagtccgcatactggcgcgaccaggcacgcctgcagctg
cgtcgcctctgcgtcgtcttccctgactgcgacggcggcgatgacgctcccgctattacg
cgcgcgctcaaccacgactgccgcaagaagggccttgtcgttctgcccggaccgcagtac
aagatcgcgactctcatgaacactacggcgatggacgacgttgtcatccaccagttcggc
aagttcctatggacgcccgacatcgactactggctctcggtttctgaggaggtcggcttc
cagaaccagagctccgtgtggttcttcggcggcgaccgcgtcacctgggacggccacggc
gatgctacgctcgacggcaatggccaggtctggtacaactgggctcgtggccgcggcaac
ctccctcaccgtcccatgatgatcaacttccgcggcctcaacaactctgtcgtccgcggc
gtcaactttttccagacgcagatgtggacgatggcgctcatgtggtcgaacaacgtgatc
atggaggacatctacgtcaacaacacctccactcgtcccggagaggcgcaccctctcaac
acggatggcttcgactcgctctactctgacaacatcacgctccgccgctggaagatcaag
tccggcgacgacgccatcgcgctcaagggcaactcgaccaacttcttcgtcgaagacatc
gagatctggggcggccagggcttcgccgtcggctcgattggtcagtacaacggcgtctac
gaagtggtcgagaatttcttcgtccgcaacgtcactctccacaacgccaactacgtcttg
tacctcaagtcctggcccggaaagcagtatggctacccgcccaatggcggcggcggtggc
tacgggcacggtcgcaatgtcgtcttcgaggacatcaagatcgaccaaggtcgcagccag
ccgttctacgtcatccaatgcgagaactacgagggccactcgggcgaggattgcgactcc
tccaagttccacttcctcgacgtcacgtggcgcaacgtcaagggcaccgtgaactcgaac
gtcgagcgcgcgtcgtacttcatctgctccgaagcggctggcggatgcaccaacttcacc
gttgccgacttcgacgtccgccccgtcggcaaggacgcgatcctcagcaagtggtcgtgc
cacaacgtcaacgccaacaacggcttcgagtgcaatgacttgttctga
DBGET
integrated database retrieval system
