Auricularia subglabra: AURDEDRAFT_138349
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Entry
AURDEDRAFT_138349 CDS
T03129
Name
(GenBank) Utp21-domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
adl
Auricularia subglabra
Pathway
adl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AURDEDRAFT_138349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_138349
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AURDEDRAFT_138349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_VPS8
WDR90_beta-prop_4th
B-prop_COPA_B_2nd
Beta-prop_WDR35_2nd
WD40_RFWD3
Cytochrom_D1
Utp12
Hira
Motif
Other DBs
NCBI-ProteinID:
EJD42191
JGI:
138349
LinkDB
All DBs
AA seq
925 aa
AA seq
DB search
MPPNALANFEGARPRKRLRTDDATAADASRPGLFAPFRALGFVTNSVAPAIQTRASKGSS
DEPRIHIASCLERAWALWEGGKMGLLFVGPDAPHPISSIALNGDEVWVAAGPLIIQYIRG
KETLRYENPLETNLSSILIFGPQVLALTEDGTRLLLWDTKENVFQNMITFENGFSATLMM
HPATYLNKILVASAEGAMQLWNIKTQKCIFTFEANSLRQRIDTRNPGTITCIAQAAIDVI
GIGFSTGELSVYDIHANELITRFFMEGGALRSVAFRNGEKVVATANAAGHIAFWDLEDNC
LLHILRGAHDAAITHIEWIPGHAILVSSGEDNSIKQWVLDSLGAPPRLLKFRSGHPVAPS
LLRYYGADGKVLLSAAQDRAVRMTSVVRDARSAELSQGPGLAKKSASLAVSASSLKLQAV
TAMSFSTTRARDWDDLLTAHKDEGFARTWSVANLRIGKQTFVFPESKGERAGVVTAVCVS
ACGNFGVCGSATGQVAIWSMQSGLLRKAFSVPASAAGKSRAVSGLVSDALNTTLIVSTLD
GTLTFFDFHTATQQSTLKLKSSADTLALQRDSNLLAVVCGDRHVRIVDIETQRIVRELDC
RARIRDITWSTDSRWLIAACYDRAIRTFDVPSGRLVDVFRTPDVPTAVAMSPTGDFLATT
HVNCLGIYLWANRAQYAEVPLRTVNEDEVAEVAIPSVQGQAEEDALEALTGLTLEDTQRV
FESADQLNGELVTLTLLPRVKWQTLLNLEVISQRNKPKEPPKAPEQAPFFLPTLPGVEHR
FAIDAPEAPPSRRLRAGATASAESEFVRRLAEEELDGDHEDFFQYARELSPAALDAELRS
LVQLTALERFIRALTARLRVRRDFEAVQAMMGVLFRVHGDLLAENAELQEPLQALARTQK
EEGKRILEMTAQAMGTLAFVQAAPS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaacgctctcgcgaacttcgaaggcgctcgtccgcgcaaaaggctgcgtaca
gacgatgccacagcggcagacgcgtcgcggccaggtcttttcgcgccttttcgcgcgctc
ggcttcgtgaccaacagcgtcgcgccggccatccaaacgcgtgccagcaagggctcctcg
gacgagccgcgcatacacatagcgagctgcttagaacgggcgtgggcgctgtgggaaggc
ggcaaaatgggcctgcttttcgtcgggcccgacgcaccgcatcccatatccagcattgcg
ctaaacggagacgaggtatgggtcgctgctggcccgctgataatccagtatattcgcggg
aaggagacgttacgatacgagaacccccttgaaactaacttatcgtcaattctcatattc
ggacctcaagtattggctttaacggaggacggcacgcggttactcctgtgggataccaag
gaaaatgtgttccagaacatgattacattcgaaaacgggttttctgcaacgctcatgatg
cacccggcaacatatctgaacaaaatcctcgtcgcgagcgcagagggcgcaatgcaacta
tggaacatcaaaacgcaaaaatgtatatttaccttcgaggccaactcactgcgccaacgc
attgacactcgcaatcccgggacgattacttgcatcgcgcaagcggccatcgacgtaatt
ggaatcggcttctcgacgggcgagctcagcgtgtacgacatccacgcgaacgagctcatc
acgcgcttcttcatggaaggcggcgcactgcgttctgtggctttccggaatggcgagaag
gtcgtcgccacagcaaacgcggccgggcacatcgccttctgggacctagaggacaactgc
ctgctgcacattctgcgcggcgcgcacgatgcggccatcacgcacatcgagtggataccc
ggacacgcgatcctcgtcagctcgggcgaggacaatagcatcaagcaatgggtgctggac
tcgctcggcgcaccaccgcgccttctcaagttccgctcggggcaccccgtcgcgccgtcg
ctcctgcggtactacggcgccgacggcaaggtgctgctgagcgcggcgcaggaccgcgcg
gtgcggatgacgagcgtcgtgcgcgacgcgcgctccgccgagctctcccaaggccccggg
ctcgcgaagaagtccgcgagcctcgcggtgtccgcgagcagcctgaagctgcaggccgtc
acggccatgagcttcagcacgacgcgcgcgcgcgactgggatgacctgctcaccgcgcac
aaggacgagggcttcgcgcgcacgtggagcgtcgcgaacctgcgcatcggcaaacagacg
ttcgtcttccccgagagcaagggcgagcgcgcgggcgtcgtcacggccgtctgcgtcagc
gcctgcggaaatttcggagtgtgcgggagcgcgacgggtcaggtcgccatctggagcatg
cagtccgggttgctgcgcaaggcgttcagtgttcccgcgtctgcggccggcaagagtcgc
gcggtgtcgggcctcgtgagcgatgcgctcaacacgacacttatcgtcagcacgctcgat
gggacactcacattcttcgactttcacactgcgacgcagcaaagcaccctcaagctgaag
agctctgccgacacactcgcgctgcagcgcgacagcaacctgctagccgtcgtctgcggc
gaccggcacgtccgcatcgtggacatcgaaacgcagcgcatcgtgcgcgagctggactgc
cgcgcgcgcatccgcgacatcacctggtcaaccgactcgcgatggctcatcgctgcatgc
tacgaccgcgcgatccgcaccttcgacgtgcccagcggccggcttgtcgacgtgttccgc
acgcctgacgtcccgactgctgtcgctatgagccccactggcgacttcctggccactacg
catgtcaattgccttggtatttacttatgggcgaatcgcgctcagtacgccgaggtcccg
ctcagaaccgtcaacgaggacgaggtagccgaagtggccataccgtccgtccagggacag
gccgaggaagatgcgttggaagctttgacaggcttgacactggaggacacacaacgcgtg
ttcgagtctgccgaccagctgaacggtgaacttgtgacgctgacactgctgccacgcgtc
aagtggcagacgctgctcaaccttgaggtcatctctcaaagaaacaaaccgaaagagccg
cccaaggccccagagcaggcgccgttcttccttcccacgttacctggcgtcgagcaccga
tttgcgatcgacgcgccggaggcgccgccatcccgccgtctgcgagccggggcgacggcc
tcagcggaaagcgagttcgtgcggcggttggccgaggaagagctcgacggagatcatgaa
gacttcttccaatacgcgcgcgaactctcccccgcggcgctcgacgctgagctgcgcagt
ctcgtgcagctgacggcgctcgaacgattcatccgcgcgctgaccgcgcgcctacgcgtg
cgccgcgacttcgaggccgtgcaggccatgatgggcgtgctcttccgcgtacacggcgac
ctccttgcggagaacgccgagctgcaggaacccctgcaggcgctggcaagaacgcagaag
gaggagggtaagaggatactcgagatgactgcccaggcgatgggcacgcttgcgttcgtg
caggctgcaccatcgtga
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