Auricularia subglabra: AURDEDRAFT_142018
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Entry
AURDEDRAFT_142018 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
adl
Auricularia subglabra
Pathway
adl03030
DNA replication
adl03410
Base excision repair
adl03420
Nucleotide excision repair
adl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURDEDRAFT_142018
03410 Base excision repair
AURDEDRAFT_142018
03420 Nucleotide excision repair
AURDEDRAFT_142018
03430 Mismatch repair
AURDEDRAFT_142018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adl03032
]
AURDEDRAFT_142018
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_142018
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_142018
DNA replication proteins [BR:
adl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AURDEDRAFT_142018
DNA Replication Termination Factors
ELG1-RFC complex
AURDEDRAFT_142018
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AURDEDRAFT_142018
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AURDEDRAFT_142018
Check point factors
HRAD17(Rad24)-RFC complex
AURDEDRAFT_142018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_16
RuvB_N
AAA_2
AAA_5
AAA_30
AAA_assoc_2
AAA_24
SLFN-g3_helicase
AAA_7
AAA_14
AAA_28
Mg_chelatase
AAA_19
DEAD
ResIII
DUF815
bpMoxR
AAA_3
AAA_25
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
EJD52908
JGI:
142018
LinkDB
All DBs
AA seq
376 aa
AA seq
DB search
MFLKGKQPAKKDAAKHTVDPQLQPWVEKYRPKTIEDVTAQEHTVAVLRKTLTSTNLPHML
FYGPPGTGKTSTILALARQLYGPDNFRTRVLELNASDERGITIVREKIKDFARQTPRANV
ASSDGQTYPCPPYKIIILDEADSMTQDAQAALRRIMENYARITRFCLVCNYVTRIIEPLA
SRCSKFRFKPLDNSSTHGRLEYIAQQEGVNISQDTIKSLIACSGGDLRRSITYLQTASRL
ANAQPISPRDIQEIAGVVPDVVVNDFARTLGVDTRYGPTAKADEDSMSVDASAVPDKGFM
PVRKKVAALMREGYSGAQLLTQLHDVIIENDNINSKQKSKCALVFAEADKALCDGADEEL
WILEVALRCSKILASD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaagggcaagcagccagcaaagaaggacgcggcgaagcacaccgtcgacccc
cagcttcaaccatgggttgagaaataccgaccaaaaaccatcgaagacgtgaccgcgcag
gagcacacggtcgccgtcctccgcaaaacgctgacatccactaatttgccacatatgctg
ttctacgggcctccaggaacgggcaaaacaagcacaatccttgcacttgctcgacaacta
tacgggcccgacaactttcgtacgcgcgtgctcgagctcaacgcctccgacgagcgtgga
atcaccatcgtccgcgagaaaatcaaggactttgcacgccaaacgccgcgcgcaaacgtt
gcctcgagcgacggacaaacatatccttgtccaccatacaagattatcatcctcgacgaa
gcagactccatgacgcaggacgcgcaagcagcgctccgtcgtatcatggaaaactacgcg
cgcataacgcgtttctgcctcgtctgcaactacgtgacacgcattatcgagcccctcgcc
tcgcgttgttccaagttccgcttcaagccgctcgacaacagctcaacgcacggccggctg
gagtacatcgcacagcaagagggcgtgaacatctcccaggacacgatcaagtcgctcatc
gcgtgctcaggcggcgacctgcgccgctcgataacctacctccagaccgcctcgcgcctc
gcaaacgcacagccaatctccccgcgagacatccaagaaatagcaggcgttgtacctgac
gtggtggtgaacgactttgcacgcacgctgggcgtcgacacgcggtatggcccgacggcc
aaggcggacgaggactcgatgagcgtcgacgcatccgccgttcccgacaagggcttcatg
cccgtgcgcaagaaggtcgccgcgctcatgcgcgagggctattccggcgcacaactgctc
acccagctacacgacgtgatcatcgagaacgacaacatcaactcgaagcaaaagtctaag
tgcgcgctcgtcttcgccgaggcggacaaggcgctgtgcgacggcgcggacgaggagctg
tggatccttgaggtcgcgctgcgctgcagcaaaatcctcgcgtcggactaa
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integrated database retrieval system
