Auricularia subglabra: AURDEDRAFT_144407
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Entry
AURDEDRAFT_144407 CDS
T03129
Name
(GenBank) vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
adl04131
]
AURDEDRAFT_144407
Membrane trafficking [BR:
adl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
AURDEDRAFT_144407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
CCDC53
Motif
Other DBs
NCBI-ProteinID:
EJD47755
JGI:
144407
LinkDB
All DBs
AA seq
3150 aa
AA seq
DB search
MWFSTPIKNTLNTVINSVAAPYIENFDLKGLEYGLGQGVATMSQLRLKKGVFDKFRLPVD
VQEGFLGTLTLKVPWANITTKPVEIYIDNVYLLVVPAAGSKFDPKEDEQRAQEAKQERLR
SAEAIQQATKAPAEQEDAQSQGFLSSLITKLLNNIQITVKNIHVRYEDKLSCPGHPFAAG
VTLAGFTVISTNEDWVPQFIQSTKDAVHKLATLDSMAVYFDTDAESLAGLPADEAIAKFT
SLIAKSGGEQLPDHQFILKPVSGVGKVVVNPHLDSQTPKIDLNLSFDTIGVCVDDAQYRD
AISMVDMFHFYIRYNQYRKYRDPVAEQSSRSRALLRYAGRAILAEVHDKNRRWSWSYFAE
RRDERRNYVELFKKQTVSQLSADEATELAALERKLVYEDIRFYRSIARSQVSKDKAARRQ
LEERRRREQPKSSGDGGWLAWAWGSSSTQTQSEDATFDTMTAQQRQELYDAIEYDEKAAI
AESFNTARDAMKLRVRAELNRGTFELRSDPHGRNAEVVSIIFESFRAGFVQRPENFEVKL
SLGGLAVFDGTTRDTPYHQIVRVKDEHSRAMSMASEVEGDEKYANRFFFAKFEKNPLDER
ADTALTVKMRYMEIIYHKEFVEAMYNFLNPPESQLESVEALLDAASNTLEGFRRETRAGL
EYALQTHKTLDVKLDMNAPIIIIPEDIKTTKCRHLLVDAGHISVESDLADKSAIKSLQRK
RNQVFTDEDLHKLEALMYDKFFLKLKSAQFVIGNDMDSSLAALRDESPQAQNLHLLERIN
IDLSLHKSIVPGALNLARFRVSGRLPTLKANLSDVKYKALMRFIDVAIPKLGSDTPASTV
APVRAEGETTGPTFRLPPVFSTGPEEYTVADEDEQQDGAEGEEFFEASEGPLANIHQHTF
EFNFKVDRLEAAIAKMARDGREKALGDLVLQQFELNFALAKFDMRVDVRLRSLSVDTFRA
NGQTMTLLTSRDAQANQERDLLIVTYKRVQPESPEFLTVFEGVNQSVDVALSTFVVHAEP
EPVITLYNFIMSTFVPGNDGSTSSRPSAAPRQDSEVSAAIVLPEPRPAQQPASSSDKLSV
HVKLDSFLVFLVNTSAQFATLSLSAADVTVLINGPTMRVAARLENISLTDDSQIDRDPVN
AQLLSIEGKEVAHVIYETFDVSKQPANNSINSSITFHAGALKFRFVEKPLHDIYAFLIKL
ARLKGLYDAATQAAVQRASELEVQRMKFDVHVQSPIVIFPWNVRAPRDVLTVKLGEISAS
NHFEMTENRFKATLRGIQMTSTLYYNDQPSTLKVVDDVEIVADIIQPQAINRAVDMELPD
TRISVQLSDIKLALTQTQYQLLLALLQSIPRVFILDAAEASVSSSPTTPSPTPSPPPSQD
VSQMATHPSTDLQPELVPSADAEQRPWPTLDLEVTIGAVKLHLYDANATDTASLKNCGIA
RFALNNNAVRIKMLSDGSMEAEVVLKSFTMGNTFPGPSRFREIIPAAQHERNQFMILYTA
SGGPDSSALAIVTVDSPQIIFAVDPIFALMNFFQSTGESTSTISATEQNVVEQAQPQQPP
PAPTRSLDFRVDLHDVSIIILESDSDSDAQAIHLSIQQILMSQQGVLALTIDKLGMSLTR
MGHPSERVSFLDDLDLTLTIDGRNVSEQQLTSIELDIKPIVLRASYRDINLIMTIVNKAI
ALSTSDSAGKSKSPSPASNRSAASKKITAPSSKRALASARFSGGDAPQLLMTKEQLKATF
DGFRLILIGDVHEMPILHLKTKPFVMTAKDWSAELHATTTILTAIEYWNITNSHWEPLIE
PWSFAVLVSKDIATDALSVSWTAKDRLDVNVSSTAVELGLATASAMTAAGDRVLKKARGG
DAPYKIRNRTGCPLRIWTDSEGAAAQEPGEALRLADGDSCDWRFDDWKTMREHVSTVGRH
NTISILLDGKPWEALTAVPVDREGKFTYALRPKIDPQPTRLLCEITVEDNVKVVTFRSTY
KIENKTLYPIELSVDIDSRPYMVQKLAPGQEYALPIDAVMHNVRLRPDPGFAYVFSQPIR
WENLVKNPTQTISCVHESVARGSNVSPKHQEPPFHFHAWAQFDVNDPAARKYPKMTLKLH
APIELENLLPYDLEYLIFDKHSNQSWGSFLRKGGIMPVHSVQLSHLVLMNVKVQDAGFKP
SDFAIINTDSPSDFEIEKRLILQDAQGRKLDVRINYMRHHNAGGAFRAQIYSQYVVINKT
GMPFAIRAGRAATGGREVAGVSSPESANNNTKPILLSHPYDKGHEFSFRVGNSAWSKFIN
FEAPGAEVGVSIPSSANRAAEFNLGLSWTEGVGKYKLSKVITLSPRFILKNMLDEVICFR
EHGMAPEEQNSLQPGQRRPLMTFRPEQERLLTFAYPGLNAKWCAPINVENIGSVHMRMTS
PGNQDNEHLLRADVLVEGATIFIVLHRETDRWPFTIENHSQYSIKLAQTDEDRQLTLADW
QKQRLAHTYVLPPKAALDYAWDFPASPDKKITLFINGRVREVDILEIGNLPPFEFPLPPD
ARGDRRRAAVSIDVRAEGKRQILTISPYRAETSLYKPRRSAVGTLSRQDTLSSVEGFEAV
TQDALPTFIFKLDFDGLGVSLVNKRLVEVVYLTLQGIHIEYSMSSTSQGISFHCQTIQLD
NQLQEALYPVVLQPTPLSRNNSPIGAPPTIQVSLIVLNDHDHGVTFVKYASILLQALSIQ
LDEDFLFAVYDLTKLKGASWEQEQESVLIQNAGDIQEPSGPSKDGQELYFEVLELQPIQL
AISFMRTERVNADEKLATDNPLAVILNALTMAAGNINDAALRMNALAIKDMRLTVPELQT
RIIYHYRQEVLRQLYRVLFSADLIGNPVGLFTNVSSGVKDVFYEPFHGVVHGNTDLGAGI
AKGAASFVKKTVFGLSDTVTKVTGSIGKGISAATLDAEYQNQRRLNQRRNKPRHAIYGVT
AGAEAFATSVRSGAEGLVLKPIEGAESGGAFGFFKGVGQGLVGAVTKPVVGVFDLASNVA
EGIRNTTTVFDRPNRDRVRYARLVPADGVLVPYSPREALGQSWLRDLEHGRYKRESYVAH
IELPEGDSVVLLTTSRILSFWSRRLKLEWDMPFSSVTAVNIEDTGILFKDKEGSYRDRFV
HIPKPSSKEWFFNQISRVVRQYNARRRVDK
NT seq
9453 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctcaacgcccatcaagaataccctaaatactgtaattaattctgtcgcagca
ccgtacatcgaaaacttcgacttgaaaggactggaatatggactcggccaaggcgtcgcc
accatgtcgcagttgcgcctcaagaagggcgttttcgacaagttcagattaccggtcgat
gtacaagaaggattcttgggcaccctaaccctgaaagtaccatgggcaaatatcaccacc
aagcccgtcgagatctacattgacaacgtctatttgcttgttgtacccgcagctggcagt
aagtttgatcccaaggaagacgaacagcgcgcccaggaggcgaagcaagagcggctccgg
agcgccgaagccatccaacaggccaccaaggcccctgccgaacaagaggacgcacagtcg
caaggtttcctctcgagcttgatcaccaagctcctcaacaacatccagatcactgtcaag
aatatccacgtccgctatgaggacaagctcagctgcccaggccaccccttcgccgcgggt
gtcacgctcgcgggcttcacggtcatctccacgaacgaggactgggtcccccagtttatt
cagagcacgaaggatgcggtgcacaagctcgccacgctcgactccatggcggtttatttc
gacaccgatgccgagagtctcgccggccttcccgccgacgaggcgatcgccaagttcacc
tccctcatcgcgaagagcggcggcgaacagctgcccgatcaccagttcatcctcaagccc
gtgtccggcgtgggcaaggtcgtggtgaacccgcatctcgacagccagacgcccaagatc
gacctgaatctgtcgttcgacacgatcggcgtgtgcgtggacgacgcgcagtatcgcgac
gccatctccatggtcgacatgttccacttctacatccgctacaaccagtaccgcaagtac
cgcgaccccgtggcggagcagtcgagccgctcgcgcgcgctgctgcgctacgccggacgc
gccattctcgccgaggtccacgacaagaaccggcggtggtcgtggtcgtactttgcggag
cgccgcgacgagcggcgtaattacgtcgagctgttcaagaagcagactgtctcgcagctc
tcggcggacgaggctacggagctcgcggcactcgagcgcaagctcgtgtacgaggacatt
cgcttctaccgctccattgcgcgctcgcaggtctccaaagacaaggcggcgcgacgccag
ctcgaggagcggcgtcggcgcgagcagccgaagtcgagcggcgacggcggctggctcgcg
tgggcgtggggcagctcgagcacgcagacgcagtccgaggatgctacattcgacacaatg
acggcgcagcagcggcaggagctgtacgacgcgatcgagtacgacgagaaggccgcgatc
gccgagtcgttcaacaccgcgcgcgacgcgatgaagctgcgcgtccgcgcggagctgaac
aggggcaccttcgagctccggagcgacccccacgggaggaacgccgaggtcgtctccatc
atcttcgagtcgttccgcgcgggcttcgtgcagcgcccggagaacttcgaggtcaagctc
tcgctcggcgggctggccgtcttcgacggcacgacgcgcgacacgccgtaccaccagatc
gtgcgcgtcaaagatgagcactcgcgtgcgatgagcatggccagcgaggtcgagggagac
gagaagtacgccaaccgcttcttcttcgccaagttcgagaagaacccgctcgacgagcgg
gccgacactgcgctcactgttaagatgcggtacatggagatcatctaccacaaggaattc
gtcgaggcgatgtacaacttcttgaacccgccggagagtcaattggagtcagtcgaggcg
ttgctcgatgctgccagtaatactctggaaggcttccggcgcgagacacgcgctggtttg
gagtacgcactccagacccacaagactttggacgtcaagctggatatgaatgcgcccatc
attatcatcccagaggacatcaagacgacgaagtgccgtcatcttctcgtcgacgccggt
cacatctccgtcgagagcgacctcgcggacaagtcggcgatcaagtcgctgcagcggaag
cgcaaccaggtcttcaccgacgaggacctacacaagctcgaggcgctcatgtacgacaag
ttcttcttgaagctcaagtcggcgcagttcgtcatcggcaatgacatggactcgtccctg
gccgcgctccgcgacgagagtccgcaggcccagaacctccatttgctcgagcgcatcaac
atcgacctctcgctacacaagtcgatcgtcccgggtgcgctcaatctcgcgcgcttccgc
gtatccggtcggctgccgacgctcaaggccaacctgtccgacgtcaagtacaaggcgctc
atgcgcttcatcgacgtcgccatcccgaagctcgggtccgacacgccggcgtcgactgta
gcaccagttcgtgccgaaggcgagactactggcccgaccttccgcctgccgcctgttttc
tcgacaggtccggaggagtataccgtcgcggatgaggacgagcagcaggatggcgcggag
ggcgaggagttctttgaagcgtcggaaggcccattggcgaacattcaccagcacacgttc
gaattcaacttcaaggtcgacaggctggaggccgcgattgcgaagatggcgcgcgacggc
agggagaaggcgctcggagatctcgtcctccagcagttcgagctcaactttgctcttgcg
aaattcgacatgagggtggacgttcgactgaggtcgctctcggtcgacacgttcagggcg
aacgggcagacgatgacgctactgacctcgcgagacgcccaggccaaccaggagcgcgac
ttgcttatcgtcacatacaagcgcgtgcagcccgaatctcccgagttcttgaccgtgttt
gagggcgtgaaccagagcgtcgacgtcgccctgtccacgttcgtggtacacgccgagcct
gagccggtcatcacgctgtacaacttcatcatgtctacattcgttcctggaaatgacggc
tcgacgtcatctcgcccatcggccgccccgcgacaggactcggaggtctccgcggccatc
gttctgccggagccgcgcccggcgcaacaaccagcttcgtcctcggacaagctctccgtc
catgtcaagctagacagtttcttggtattcttggtcaacacatcggctcagtttgccacg
ctctccctgtcggcagccgacgtcaccgtgctcataaacggccctacgatgcgcgtcgcg
gcccgcctcgagaacatctcgctcaccgacgactcgcaaatcgacagagaccccgtgaac
gctcaacttctgtccatcgaaggcaaggaggttgcgcacgtcatttacgagaccttcgac
gtcagcaagcagccagcgaacaacagcattaactcctccatcactttccatgctggtgct
ctcaagttccgcttcgtcgagaaaccgctgcacgacatttacgcgttcctcatcaagctc
gcgcggctcaagggcctgtacgacgcggcgacgcaagctgccgtccagcgggcctccgag
cttgaggtgcagcgcatgaagttcgacgtccacgtgcagtcgcccatcgtcatcttcccg
tggaacgtgcgtgcgccgcgcgacgtactgaccgtcaagctaggcgagattagcgcgagc
aaccatttcgagatgaccgagaatcggttcaaagcgactctgcgcgggatccagatgacc
tcgacgctctattacaacgaccagccgagcacgctgaaggtcgtggacgatgtcgagatt
gtcgcggatatcattcagcctcaggcgatcaaccgcgcggtggacatggagttgcctgac
acgcggatttcggtgcaactgtccgatatcaagctcgctctcacgcagacgcagtaccag
ctgctcctggcgctactgcagtccatcccgcgcgtcttcatcctcgatgctgctgaagcc
tcagtgtcaagctctccgacaacgcccagtccaacgccgtcgccgccgccttcccaagac
gtctcgcaaatggcaacacatccctcgactgatcttcagcctgagctcgtcccatcggcc
gacgcagagcagcgtccatggccgacgttggacctggaggtcaccatcggcgccgttaag
ctccatctctacgatgcgaacgcgacggataccgcgagcctcaagaactgcggtattgcg
cgctttgctctgaacaacaacgccgtgcggatcaagatgctgtccgatggctcgatggag
gccgaagtcgtgctgaagtcgttcacgatgggcaacaccttcccaggcccttcgcgtttc
cgcgagatcattcccgccgcacaacacgagaggaaccagttcatgatcttgtacacggcg
tctggcggccccgacagctctgctcttgcgatagtgactgtcgactccccgcagatcatt
ttcgcagtcgaccctatctttgccctgatgaacttcttccaatcgaccggggagagcacc
tcgaccatctcggctaccgagcagaacgtcgttgaacaagcgcagcctcagcagccgcct
ccagcaccgacgcgtagtctcgacttcagagtcgacctgcacgatgtctccatcatcatt
ttggaaagcgactcggacagcgacgcgcaggcgattcacttgtcgattcagcaaattctc
atgtcccagcagggagtcctcgctctgacgatcgacaagctcggtatgtccttgaccagg
atgggtcatccttcggagcgagttagcttcctcgacgatttggacctcaccctaaccatc
gacggccgcaacgtgagcgagcagcagcttacgagcatcgagttggacattaagcctatc
gtcttgcgggcctcctaccgcgacatcaacctcatcatgacgattgtgaacaaagccatc
gcgttatccacgtcggacagcgcgggcaaatcgaagtcgccctcgccagcgtccaacagg
agcgctgcgtcgaagaagattaccgctccgtcatcgaagcgggcgttggcctccgcgaga
ttctcgggaggggatgcgccgcagctgttgatgacgaaggagcagctcaaagctacgttc
gacgggttccgcctgatactcattggagacgttcacgaaatgcccatcctgcatctcaag
acgaaaccattcgtcatgacggctaaagactggtccgcggagttgcacgcaactacgaca
atcttgaccgcgatcgaatactggaacatcacgaactcgcattgggagccgttaatcgag
ccatggtcctttgctgtgctggtctcgaaagacatcgcaactgacgcattgagtgtctcc
tggacggcgaaggaccgtctggacgtcaacgtcagctcgaccgctgttgagctcggccta
gctacagcatctgcaatgacggccgccggagaccgcgtcctgaagaaagctcgcggtgga
gacgccccgtacaagattcgcaaccgcacaggctgtccactgcggatatggaccgacagc
gagggcgcagcagcgcaagaaccaggagaggcgttacgactcgccgacggggattcctgc
gactggcggtttgacgattggaagacgatgcgagagcacgtctcgacggtcgggcgtcac
aacacgatcagcattctccttgacggcaagccttgggaggctctcacggctgttccagtc
gaccgcgagggaaaattcacgtatgcactgcgccccaagatcgacccgcagccaactcgc
ctcttatgcgaaatcacggtcgaggacaacgtgaaggttgtcacattcagatcaacgtac
aagatcgagaacaagacattgtaccccattgagttatcggtcgacatcgactcgcggccg
tacatggtgcagaaacttgctcccggccaagaatacgccctgcccatcgacgctgtgatg
cacaatgtgcgcctgcggccggatcccggcttcgcttacgtgttctcgcaacccatccgc
tgggagaatctagtcaagaaccctacgcagacaatatcttgcgtgcacgagagtgttgcg
cggggcagcaacgtgtcgccgaagcaccaagagccaccgttccatttccatgcctgggcc
caattcgatgtgaacgatcctgccgcacgcaagtatcccaagatgacgctcaaactccac
gcaccgattgagctagagaatctcctgccgtacgacttggagtacctcatcttcgataag
cattcgaaccagagctggggcagcttcctgcgcaaaggcggcattatgcccgtgcactcc
gttcagctgagccatctcgtcctgatgaacgtaaaggttcaggatgcaggtttcaagccg
agcgacttcgcgatcataaataccgacagtccgtctgacttcgagatcgagaaacgtctc
atcctgcaagatgcgcaagggaggaagctggacgtgcgaatcaactacatgaggcatcac
aacgccggaggcgcattccgcgctcagatatactcgcaatacgtggtaatcaacaagact
ggcatgccatttgccattcgcgcgggtcgtgcggctacgggtggtcgagaggtggctggc
gtttcgagtccagagagcgcgaataataataccaagccgattctcctctcccacccgtac
gacaagggccacgagttcagcttccgggtcggcaactctgcctggtctaagttcatcaac
ttcgaagctccaggtgccgaagttggcgtgtcgatcccatccagcgcgaacagagctgct
gagttcaatctcggattatcctggaccgaaggcgtcggcaaatacaagctttcgaaagtc
atcacgttatctccgcgcttcatcttgaagaacatgctcgatgaagtgatctgcttccgc
gaacatggcatggccccagaggagcagaattcgcttcaacctggccagcgccggccactg
atgaccttccgtcccgagcaagaacgtctgctcaccttcgcataccctggtctcaatgcc
aaatggtgtgcgccgatcaacgttgagaacattggctcagtccacatgcgcatgacctcg
cctggcaaccaggacaatgaacatcttctccgcgcggacgtcctggtcgaaggagctacc
atattcatcgtgctccaccgagagactgaccgctggccgttcaccatcgaaaaccacagt
caatattcgatcaaattggcgcagacggacgaggaccggcaactgacgctggccgattgg
cagaaacagcgactcgctcacacctacgtccttccgccgaaagcagcgctggattatgcc
tgggacttccccgcgtcccccgacaagaagattacgctcttcatcaacggtcgcgtccgg
gaagttgacatactggaaattggtaatttgccacctttcgaattccccttacctccggat
gcaagaggtgacaggaggcgggccgcggtttccattgacgttcgtgccgagggcaagcgg
cagattttgacaatctcgccataccgcgccgaaacgagtctctacaagccaagacgatcc
gcggtggggactttgagtcgacaagatactctatcgagcgtcgagggcttcgaggcggta
acccaggacgctttgccgacgtttatcttcaaacttgactttgacggccttggggtctcc
ctcgtcaacaagcggctcgtcgaagttgtgtacctcacgctgcaaggtatccatatcgag
tattcaatgtcttcgacttcgcaaggcattagtttccactgccagaccatacagctcgac
aatcagctccaagaagcgctctatcccgtcgttctccaaccgacgcctctatcccgtaac
aacagcccgatcggagcgccgcctacgatccaggtgtctttgatcgtgctgaatgatcat
gatcacggtgtaactttcgtgaaatatgcttcgattctgctgcaggccttatccatccag
cttgacgaggactttctcttcgccgtgtacgacttgacaaagctgaagggggcgtcctgg
gaacaggagcaagagagcgtccttatccagaatgccggagacatccaagaaccatccggt
ccgtccaaggatgggcaggaactttatttcgaggtcctcgagctgcagccgatccagctc
gcgatatccttcatgcggacagaacgcgtcaatgcagatgagaagcttgcgacagacaat
cctctagcggtgatcttgaacgcgctgacgatggctgccggcaacatcaacgacgccgcg
ctccggatgaacgccctcgcaatcaaggacatgcggttgacggtgccagagttgcagaca
cgcatcatatatcactaccggcaagaagtactacgacaactataccgcgtattgttctct
gcagacttgatcggcaacccggtcggactcttcacgaacgtcagctctggcgtcaaggac
gtgttctacgagcccttccacggcgtcgtgcacgggaatacagacctcggagccggcatt
gcgaagggcgctgcaagctttgtcaagaagacggttttcgggttgtcggatacggtcacc
aaagtcacgggcagcatcggcaagggcatatctgcggccacccttgacgccgagtatcag
aatcagcgacgattgaaccagcgacgcaacaaaccacgccacgccatttatggtgtcaca
gccggggctgaagctttcgctacaagcgtcaggagtggcgctgagggactggtgttgaaa
cccattgagggtgcggagtctggcggggcgttcggcttcttcaagggtgtcggccaaggc
ctggtcggagcggtgaccaagcctgtagtaggcgttttcgatcttgcatcaaacgtcgcg
gaaggcatccgaaacacgaccacggtgtttgaccgaccaaatcgcgaccgcgtgagatat
gcacgtctcgttcccgcagatggcgtcctcgtcccatactcccctcgcgaggccctcggc
caatcgtggcttcgcgaccttgaacatggtcgatacaaacgcgagtcgtatgtcgcgcac
attgagctgcccgaaggcgatagcgtcgtattgctcactacgtcgcggatattatcattc
tggtcgcgcaggctaaagctcgagtgggacatgcccttctcgagtgtgacagcggtcaac
atcgaagacaccggcatcctgttcaaggacaaggaagggtcgtatcgggatcggttcgta
catattccaaagcccagcagcaaggagtggttcttcaaccagatctcgcgcgtcgtccgg
cagtacaatgcacgcaggcgcgtcgacaagtag
DBGET
integrated database retrieval system
