Auricularia subglabra: AURDEDRAFT_145146
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Entry
AURDEDRAFT_145146 CDS
T03129
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
adl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_145146
09124 Replication and repair
03420 Nucleotide excision repair
AURDEDRAFT_145146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_145146
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_145146
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_145146
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AURDEDRAFT_145146
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AURDEDRAFT_145146
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AURDEDRAFT_145146
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AURDEDRAFT_145146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
EJD44056
JGI:
145146
LinkDB
All DBs
AA seq
810 aa
AA seq
DB search
MKFFIDNLPIIFPYDRIYPEQYSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ
QFFPTKRKLIYCSRTVPEIEKALAELKRLMAYRIECAETEEERERERAFTGLGLTSRKNL
CLHPEVAKEKKGWVVDARCRDLTCTANCEKARANPGSVPVCTWHDKLGEMEPGNLIPQGI
WTLADVQAYGQEKGVCPYFTIRRMMPFVDVIIYSFHYLLDPKVAEQVSKELSKDAIVVFD
EAHNIDNVCIESLSIDLTRPMLDSAARSVTRLGDQIEEIKKTDASKLQDEYAKLVEGLQE
AADARDEDAFIANPILPDDLLTEAVPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETP
LSFLQHLKDITFIERRPLRFCAERLQSLVRTLELTRLDEMRSLQKVASFATLVATYEKGF
LLILEPFETDNATVPNPVFHFTCLDPSLAIKPIFERFSSVVITSGTISPLDMYPKMLQFT
PVVQETYPMTLTRDAFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPDG
IVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACNNGRGA
VLLSVARGKVSEGIDFDHHYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGF
DAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITDTASNLSTDMAI
VLSKLFMRSISQNVNENQTGVSLWTLEDVQKAQEKQKAMMAEAEAELARQRTGDGTATGA
TRRDADEDDEEEDEYGDMGISDSELLALDL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcatcgacaatcttccgattatcttcccttatgacaggatatatccagag
cagtactcgtacatgtgcgacctcaagcggacgcttgacgctacgggtcactgcgtccta
gaaatgccctcgggcacgggcaagacagtgtcgctgctgtcgctcatcgtctcgtaccag
cagttcttccccaccaagcgcaagctcatctactgctcgcgaacggtgcccgaaattgag
aaggccttggccgagctgaagcgactcatggcctaccgcatcgaatgcgccgagacagaa
gaagaacgcgagcgcgagcgtgcattcactgggcttggcctgaccagccgaaagaaccta
tgcctgcatcccgaggtcgccaaagagaagaagggctgggtcgtcgacgcgcgttgtcgc
gacctgacctgcaccgcgaactgcgagaaggctcgcgccaaccctggttccgttccggtc
tgtacctggcacgacaaactaggcgaaatggaaccagggaatctgatccctcagggcata
tggacccttgccgacgtccaagcttacggccaggaaaagggcgtttgtccctattttacc
atccggcgcatgatgccctttgtcgacgtgataatctattccttccactaccttcttgac
ccaaaagtggcagagcaagtctccaaggaactatccaaagacgctatcgtcgtattcgac
gaagcccacaacatcgacaatgtctgcatagagtcgctcagcatcgatttgacgcgacct
atgttggattcggcagcccgcagcgtcactcgtttaggcgaccagatagaagagatcaag
aagacagacgcatcaaagttacaggacgaatatgcaaaactcgtcgagggcctccaagag
gcggccgacgcgcgggacgaggatgctttcatcgctaatccgatccttcccgacgacctt
ctgacagaggccgtcccgggaaatattcgaaaagcggagcatttcgtcgccttcctgaag
cgcttcgtggaatatctgaagactcgcatgcgcgtcctgcatgtggtcgcagagacaccc
ctatctttccttcaacatctgaaggacatcaccttcattgaacgccgtccgctcaggttc
tgtgccgaacggctgcaatcgctagtacggacgctggagctgacgcgcctggacgagatg
cggtcgctccaaaaggtcgccagctttgcaacgcttgtcgccacttatgagaagggcttt
cttctcattctcgaaccctttgagaccgacaacgccaccgtccccaatccggtcttccat
ttcacttgtctcgacccgtcacttgccataaaacccattttcgagcgcttcagtagcgtg
gttatcacgtcaggcacgatctcgcccctggacatgtaccccaaaatgttacaattcacg
ccggtcgttcaagagacctatccgatgacgctcacacgtgacgcgttcctacctctggtc
atcacccgtgggagcgaccaagtagccgttagctcccgatttgaagttcgcaacgatcca
gccgtcgtgcgcaacttcgggagcatcctcattgaatacagcaagattgtgccagatgga
atcgtcgcattcttcccgagttatctctatatggagtcaatcgtcgcggcatggaacgac
atggggattttgaacgaagtttggaagaacaagctgatcttcgttgagacgcccgacgcg
aacgagactagtatcgcattggagaactacagaagggcctgcaacaacggccgcggtgcc
gtacttctttcagtcgctcgtggaaaggtgtctgaaggcatcgatttcgatcaccactac
gggcgcgccgtcatcatgtttggcgtcccttaccagtataccgagagccgaatactgaag
gcacgcctcgagtatctgcgagacgcctaccgcattcgcgagtcggaattcctcgggttc
gacgccatgcggaacgctgcccagtgcgtgggacgcgtcctgcgcggcaagaccgactgg
ggcttgatggtcttcgcggacaagcgattcgcgcgtgcagacaagagggccaagctcccg
cgctggataaaccagtacatcaccgacacggcgtcgaacctctcgactgacatggcgatc
gtcctctccaagcttttcatgcgcagcatctcacagaacgtgaatgagaaccaaacaggc
gtatcattgtggacattggaggacgtgcagaaagcgcaggaaaagcagaaagcgatgatg
gcagaggcagaggcggaattggcgcgacagcggactggcgatgggacagctaccggtgca
acacgtagagacgcggacgaggatgatgaggaggaggacgagtacggggacatggggatc
agcgacagcgaactgctcgccttggacttgtag
DBGET
integrated database retrieval system
