Auricularia subglabra: AURDEDRAFT_147810
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Entry
AURDEDRAFT_147810 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_147810
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_147810
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
Helicases
AURDEDRAFT_147810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
EJD55245
JGI:
147810
LinkDB
All DBs
AA seq
565 aa
AA seq
DB search
MDAFHALSIGGAKFNKGRYKNEVQLFTNKAGESSSSRPAKRSKDAAELPPELDFFKYDKG
GAAHKDARATDSEESSDEEGPATKKRRLNEDKDAATAPAPAAHRVSTKGSDVPEPLQSFA
SLKDRFSLSSRLLQNLDECGYTTPTGVQEYGIPILLEGRDLAAISPTGTGKTLAYTLPVF
ARLKSPSAKSQDIESKGVRAVILAPTRELAHQIYNECLKLAQGRKWRIVLFSKATASTLA
DKNVRDKIDIVISTPLRLVACLKSETLELDNVRHLILDEADRLLDTEFLGQVQEIYSACS
HKELQTAVFSATLPAAVEELSMQMMRNPIRIVVGLKDTPLPLIAQSLVYVSSESSKLLTL
LQHLGQPYTPPLLIFVGTQPRAGSLAEELVLHDVPNVDCLHAGMSKKEREDAVARMRNGE
SWVMITTEVMARGMDFKGVRGVINYDFPQSVQSYIHRIGRTGRAGQTGTAITYFTDADAP
YLKSIANVLLQSGSPVPDWIIKLPKPSKMKRRMMGKVKRGDDVNSAARITKGDTKKRREM
IAGSKRRKEKAAAEVGKDSKEADEE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttccacgctctctccatcggcggcgcaaaatttaacaaaggccgctacaag
aatgaggtccagctcttcaccaacaaggccggcgagtcgtcgagtagcaggccggccaag
cggtcaaaagacgccgccgagctgccgccagagctagatttcttcaaatacgacaagggc
ggcgcagcacacaaggacgcgcgtgcgaccgacagcgaagagagttcagacgaagaaggg
cctgccacaaagaagcgccggctgaacgaggacaaggatgccgccacagcgccagcgccc
gctgcgcaccgcgtctctacaaaaggatcggatgtaccagagcccctgcagtcgttcgcc
tccctcaaggaccgcttcagcctgtcctcgcgcctgctgcagaacctcgacgaatgcggg
tacacgaccccgaccggcgtacaggaatatggcattcccattctgctggagggccgtgac
cttgctgccatctcgcccacgggcacaggcaaaacgcttgcctacacgctccctgttttc
gcccgcttaaaatcgccgtctgccaagtcgcaggacattgagagtaaaggagtgcgcgcg
gtcatccttgcgccgactcgagaactcgcacaccaaatctataacgaatgtctaaagctt
gcgcaaggccggaagtggcgcatcgtgctcttcagcaaagcaacagcaagcacattagca
gacaagaatgtgcgcgacaaaatcgatatcgtgattagtacgcctctgcgtttggtcgca
tgcctgaagagcgaaacgctcgagctcgacaatgttcgacatctcatcctcgacgaagcg
gatcgtctgctcgacacagaattcctggggcaggtccaggagatctactccgcatgctcg
cataaagagcttcagaccgctgtgttcagtgcgacgctgcctgcagcagtagaagagctg
tcgatgcagatgatgcgcaacccaatccgcattgtcgttggtctcaaagacactcctctt
ccgctcatcgcacaatcgctcgtctacgtctcctccgaatcctccaaactcctcacgctg
ttgcaacacctgggccagccgtacacgccgccgctgctgatcttcgtggggacgcagccg
cgcgcgggttcgctcgcggaggagctcgtgctgcatgacgtgccgaatgtcgactgcctg
cacgcaggcatgtccaagaaggagcgcgaggacgccgtcgcgcgcatgcgtaacggcgag
agctgggtcatgattaccaccgaggtcatggcgcgcggtatggacttcaagggcgttcgc
ggcgtcatcaactatgacttcccgcagtctgtgcagagctatatccatcgtatcggtcgt
acgggacgcgcggggcagaccggcactgcgattacatacttcacagacgccgacgcgcct
tacttgaagagcattgcgaacgtgctcttgcagtctggctcgcccgtcccggattggatc
atcaagctgcccaagccgtcgaagatgaagaggcggatgatgggtaaggtcaagcgtggc
gacgatgtaaacagcgcagcacggattaccaagggagacacgaagaagcgacgggagatg
atcgcgggatctaagcgacgcaaggaaaaggcggccgcggaggtgggcaaagactccaag
gaggccgacgaggagtag
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