Auricularia subglabra: AURDEDRAFT_154894
Help
Entry
AURDEDRAFT_154894 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_154894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_154894
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AURDEDRAFT_154894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_C
Motif
Other DBs
NCBI-ProteinID:
EJD35342
JGI:
154894
LinkDB
All DBs
AA seq
1785 aa
AA seq
DB search
MLDEVDALVLLRSFLYNQGLPDSTGSDNLAEELAQAITPFYFTERLSVLRCFIPLLRARE
NDADPLHEVATKFVADVLKDPTVFIGTLVKEYSRRTQQDLPPEIMQDLPIATAWAKQLAR
EQLAMLEVIFWLLWDLVPASGPVVLQIFKPAYDTDLGRKQRHSSLLLEEEGAQILQDMES
LWLVLLVETLNLEKVLDDQTFELPAVPKDDSTVLAAPSQLKQIHELVLTVTDPRYSPITL
AWSCIVYRLYTSAEAHETVPENYEELIRLISFVADSDPPTPVYQHLLMWVLQPDVDVLRR
LAALVTQSALFVTSVAWSKGSALTEPNAIAFRAIVKGLLVGLCEMCRAEYIPDFGALVDA
WVALFGTGEPVSTAPLALQYWSEDWSRHERRQPIDIARVRFPVQFRPLVRVLASMARGRD
GAIYSFHFFNELPTFTHVVALDAAFSRTYEPDPDSSGWIAKVPLVLPGGSTIPAGSVARV
MSGDSAPGSPIVLKWDHSYSGWTLLRDVLADFARARTVQSNGKRALAPLSSADIITVRDL
GIDLSPGEEDDLIVEALTLFLNIVKYEQVLIKPLMATLEAQSRATAPNIVQLTILILEEA
LTRARPAPGAPSPERLITVCMEVLTALLPSHPARVWPYLRTTTQLFGSDARSHLGATPPM
LAAERVAGHYPMTRALISLVRAMLDDALPRAGGESEPHMLDIKEKVLLRALHLLHAEVWL
EHSGWRFRELGDRFEIARNVVGLYTDILRSNQSKGVLADFVLHEFLLHATHSSIGPLVAP
VVTGGELMATMYKARRFAEARELVLLLEALLQFARLVVVSKPDASVPCLLEHAYFSINAG
QRVPVDVVAGYVSSRELGPRIPVEATKLLTTLSISSAALAQPLAIARHLADPVATAEAMV
RIARHPYDELVLRNAVWKFMAIAVDTQPAFAGLFISGSFTVPSIAKPEESSQEKDKAADK
PNKHTAVDVARQTASNWKQLWESNPELLSSALGFLDVVWQHALEHKPALEAARRDPQFAQ
TLADIALAELGATPFSEAKSIALVDGEIVSDVNEIVVAHSHRLVAKSRALHVLALDVNVD
PPGVQAKGKGNETHSLRRLLDIFKDETKLRTQLAQAVNNSFNPDLPGALVADITVVYPAL
ALERIVDEQQRHFGDSYLFDLELLRSRLMHDLQGEDVERERSEGLLLRACSVNLNWSLAD
AQTALTQSWRRVLQYISRLLRSEAVISTILLSTAAEISTDVMIEQRNGHVMAVVHMERLG
LLLGLLETAWFGEEGADKEKDKRSLSSLLANVESLVTNDIFPAGEPLRDKNNPRYHVPLL
QIIYICVRKVRSLGGSHKSFKTEQRLTFKSAFTACAGFVVDALRIAFDLVTPNVDPSLSQ
DMELLVAVFEQVIRPEIELWSAFWLNRCQETNLIRTSLDLFARSNLQGTAEETVFARHVL
QLHLALAGVPSAAERLAHESAVAAYCSNSLAPLLAAGAVDAAVDRSPAHWIWCTMLSIVT
AILVNTALDGGVARIAEDAIGFVQVSGAQLERTLSWQVEDSLTPAFLEELERVIAFFYAF
ARAHCAVDDDAYRGDPAVGSAARAVLRAYAQRVLVLLQHLNYAVTHQNHLESLFEPASAK
PARADLVRKVLALITNVVATLSVITASDTVFLRRLADWPVAGNVFIIPNINKTHRAPASF
GTLFETINCTLDILRNDKSDPALACAAIQTAETVLTFACAQLGLWVGRKEHDADCVPAET
MRELKSDLLELLANAKRVLEKSKASGANDSAQFMVALSRFGSGLV
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttggacgaagtcgacgcgcttgtcctgctccgatcgttcctgtacaaccagggcctg
ccggacagcaccggaagcgacaacctcgccgaagagctcgcgcaagctatcaccccattc
tacttcacggaacggctgtctgttctgcggtgcttcatcccgcttctacgtgctcgggag
aacgatgccgaccccctgcacgaagtcgccaccaagttcgttgcagacgtgctcaaagac
ccgacggtcttcatcggcactctcgtcaaggagtactcgcggcgaacgcagcaggacctt
ccaccggaaataatgcaagacctgcccatcgccacggcctgggccaagcagcttgctcgc
gagcagctcgctatgctcgaagttatcttctggctcttatgggacctcgttcctgcctcc
ggcccggtcgtactccagattttcaagccggcctacgacacggacctgggacgcaagcag
cgtcactcgtctctgctgctcgaggaagagggcgcgcagattctgcaggacatggaaagc
ctctggcttgtcctcctcgtcgagacgctcaaccttgagaaggtgctggacgaccagacg
ttcgaactgcccgccgtcccgaaagacgacagtacagtactcgccgctccgagccagctg
aagcagatacacgagctggttctgactgtgaccgacccgcggtatagccccatcaccctc
gcctggtcgtgcatcgtctaccgcttgtatacgtctgcggaggcgcacgagactgtcccg
gagaactacgaggaacttatccgcctcatttcgttcgttgcggacagtgatccaccgact
ccggtgtaccagcacttgttaatgtgggtcctgcaaccggacgtcgatgttttgcggcgg
ctggctgcacttgtcactcagtcggccctctttgtcacctccgtcgcatggagcaaggga
tccgctctgacggagccgaacgccattgccttccgcgctattgtaaagggtctgcttgtc
ggtctatgcgagatgtgccgcgccgagtacatccccgacttcggcgcgctcgtcgacgct
tgggtcgcactgttcggcaccggggagcccgtcagcacggcgccgctcgcgctgcagtac
tggtcggaagactggtcgcgtcatgagcgtcgtcagcccatcgatatcgcgcgcgtgcgc
ttccccgtgcagttccggccactcgtgcgcgtgctggcctccatggcgcgcggacgcgac
ggtgcaatctactcgttccacttcttcaacgagttgccgacattcacgcacgtcgttgcc
ctcgacgcggcgttttcgcgcacatacgaacccgaccccgacagctcgggctggatcgcc
aaggttccgctcgtcctacccggcggctctacgatcccggcggggtcagtcgcccgcgtc
atgagcggcgacagcgcgcccggcagtcccatcgtgctgaagtgggatcactcgtattcg
ggctggacactgctacgcgacgtgctggcggacttcgcgcgcgcgcggacagtgcagtcg
aacgggaagcgtgcgttggcaccactctccagtgcggacatcatcacggtgcgcgacctc
ggcatcgacctttcgcccggcgaggaagacgaccttatcgttgaggccctcacgcttttc
ctgaatatcgtcaagtacgagcaggtgctcataaagccccttatggcgacgctggaggcg
caatcccgtgcaacagcgcctaacatcgtgcagctgacgatcctcattctcgaggaagcg
ttgacccgcgcacggccggcgcctggcgcaccatcgcctgaacggctgatcacggtctgc
atggaagtgctcaccgcgctccttccgtcgcacccggctcgcgtctggccgtacctcagg
acgaccacgcagctcttcggcagcgacgcgcggagccatcttggcgcgacgccgcccatg
ctggccgcggagcgcgttgccgggcactacccaatgacgcgcgctctcatcagcctcgtg
cgcgcgatgctcgacgatgcgctgccgcgcgcgggcggagaaagtgagccgcacatgctc
gacatcaaggagaaggtgctgctacgcgcgctgcatctgctccatgcagaagtgtggctc
gagcacagcggctggcgtttccgcgaacttggcgaccgcttcgagattgcgcgcaacgtc
gtcgggctctacaccgacatcctgcgcagcaaccagagcaaaggcgtcctcgcagacttc
gtcctgcacgagttcctgctgcacgcgacgcactcaagcatcggcccgcttgttgcgccc
gtggttaccggcggcgagcttatggccaccatgtacaaagcccgccgttttgccgaggcg
cgtgagcttgtgctgctcctcgaggccctgctgcagttcgcccggctcgtcgttgtcagc
aagccagacgcatcggtcccttgcctgctcgagcacgcgtatttctccatcaacgctggt
cagcgcgtgccggtggatgtagtggcgggttacgtgtcgtcgcgtgaactcggcccacgc
atcccagtcgaggcgaccaagctgctgacaaccttgagcatctcgagcgcggcgctggcg
cagcccctagccattgcgcgtcatctggctgacccggtcgctactgccgaagccatggta
cgcattgcgcgtcatccatacgacgaactcgtcctgcgcaatgccgtgtggaagttcatg
gcgatcgcggtggacacgcagcccgccttcgctgggctgttcatttcgggctcgttcacg
gtgccgtctatcgccaagccagaggagtcgtcgcaggagaaagacaaggccgcggacaag
cctaacaagcacacggccgtcgacgttgcgcggcagacggcgagtaattggaagcaactc
tgggagagcaacccggaactcctgtcgtccgccctcggcttcctcgatgtcgtctggcag
cacgcgttggagcacaagcctgcactcgaagctgcgcgtcgcgacccgcagttcgcacag
actctggcggacatcgcccttgccgagctcggcgccacgccattctcggaggcgaagagc
atagcgcttgtggacggcgagatcgtctcggatgtgaacgagattgtcgttgcccactcc
catcgtctggtggccaagtcgcgggcgctgcatgttctggccctggacgtcaacgtcgac
ccgcccggcgtgcaggcaaagggcaaagggaacgaaacgcacagtctccggcgcctgctc
gacatctttaaggacgagacgaagttgcgcacgcagctcgcccaagcggttaataactcg
ttcaaccccgacctccccggcgcgctcgttgcagacatcaccgtggtgtatcccgccctt
gcgctggagcgcatcgtcgatgagcagcagcgccacttcggcgatagctatctcttcgac
ctcgagttgctacgctcgcggttgatgcacgatctccagggggaagatgttgaacgcgaa
cggtcggaaggtctactgcttcgagcctgctcggtcaacctgaattggtcactcgccgac
gcgcagaccgctctcacgcaatcttggcgccgcgtcctccagtatatctcgcgcttgctt
cgcagtgaggctgtcatctcgaccatcctgctctccaccgctgcggagatttccaccgac
gtcatgatagaacagcgcaacggccatgtcatggctgtagtacacatggaacggcttggt
cttctgctgggcctgctcgagaccgcctggttcggcgaggaaggcgccgacaaggagaag
gacaagcggagcctgtcctcccttctcgccaacgtcgagagccttgtgacaaacgacatc
ttccccgcgggcgaaccgctgcgcgacaagaacaaccctcgctaccatgtcccgctcctg
cagattatctacatctgtgtgcggaaggttcgtagcctcggcgggtctcacaaatcgttc
aagacggagcagcggttgaccttcaagtccgcgttcactgcctgcgcggggttcgttgtc
gacgcactgcgaatcgccttcgatcttgtgaccccgaacgtcgacccgagtctctcgcag
gacatggagctgctggttgcagtcttcgagcaggtcatccggccggagatcgaactgtgg
tcggcattctggctcaataggtgtcaagaaaccaacctcatccggacgagcctggatctc
tttgccaggagcaaccttcagggcacggccgaggagactgtgtttgctcgccacgtcctt
cagctccatctggctctggccggcgttccttccgcggccgaacgattagcccacgagagc
gcggtcgccgcatactgcagtaacagcctggcgcctctactggcagctggcgcggttgac
gctgctgtggatcggtcccccgcgcactggatttggtgcaccatgctatcaatcgtgacg
gccatcctcgtcaataccgctctcgatggtggcgtagcccggattgccgaggacgccatc
ggctttgtgcaagtgtctggcgcgcagttggagcgcactctctcgtggcaggtcgaggac
tcgttgacgccggcattcctcgaggaactggaacgcgtcatcgcgttcttctacgccttc
gcgcgcgcacactgtgccgtcgacgacgatgcataccggggcgatcccgccgttggctct
gccgcgcgcgcagttctccgagcatacgcgcaacgcgttttggtgctgctgcaacacctc
aactacgccgtgacgcaccagaaccatctcgagagcctgttcgagcccgcttccgcgaag
cctgcgcgtgcagatctcgttcgcaaggtcctggcgttgattacgaacgttgttgctacg
ctcagcgtcatcaccgcgtccgatacggtgttcttgcgacgcttggctgactggcctgtc
gctggcaatgtcttcatcattcctaatatcaacaagacgcaccgcgcccctgcatcgttc
ggcacattgttcgagacgatcaactgcacgctcgacatcctgcgcaatgacaagagcgat
ccagcgctggcatgcgcggccatacagaccgctgaaacggtgcttacgtttgcgtgtgct
cagcttggcctctgggtcgggcgcaaggagcacgacgccgattgtgtgcctgcggaaacg
atgcgggagctcaagtcggaccttctggagttgctcgcgaatgcgaaacgcgtcctggag
aagagcaaggcgtctggggccaacgactctgcacagtttatggtcgctttgagtagattc
gggtctggtctggtatag
DBGET
integrated database retrieval system