Auricularia subglabra: AURDEDRAFT_156875
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Entry
AURDEDRAFT_156875 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_156875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_156875
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_156875
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURDEDRAFT_156875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-ProteinID:
EJD53635
JGI:
156875
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MAARKLQTEIDRTLKKVTEGVELFESIYDKMQACTNPTQKDKLETDLKTQIKKLQRLRDQ
IKTWVASNDIKDKTQLLEYRRLIETQMEKFKACEKEMKTKAFSKEGLIAAMRLDPAEKAK
HEASSWLTQMLDELTRQVELAEAEIETLGNAKRKHKGAASERQTTLEALNDRRKWHQSRL
EIVLRLLENGSLSPDQVNDLKDGVTFFVESNTEEGFDEDETIYDDLNLDEEETALGLGGD
DTTSDDDGASDSEDVPHHRTPLKDTRKTSHDDSASKTESVKLSPTLKKAPVVLQLKRPGG
ETRQAPPPAPNFAAQPMASAVKANIPAARPPALPPIRYAAAAAAAVNTPAAQASQSHPPA
TPAVPPTPAATNGTSNAGSYTTPSLEQQSTANTSSPSFTQPSLSNASPILSSIASPPAAS
SNPLARSTPPPQGSTNSFDSPTSSHALSENPVPQSTSSPRRSQGLSLADESPVVGTAQYA
SAAQDLQQPLLNTSNGGAPLPPGLAVAPMQLQPVAAQTMAPPGLGAKAPMVPPGMGQQAP
AYPPGVSIPQQAPTEESPAAMQQYVQRPAPNVPPALADLAQSFDGAKQRATHGPDLEQVH
KALEVGCHSIPQPQDTEKPKYYVPRNPYQTPLYYPQQPIPSLSTASVFSQLDVDTLFYVF
YFLPGTYQQYLAAKELKKQSWRFHLKYLTWFQRHSEPQAITDEYEQGVYVYFDWEGSWCQ
RKKSDFRFEYRYLSED
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgaaagctacaaaccgaaattgaccgcacgctcaagaaggtgacggagggc
gtcgagctcttcgagagcatctacgacaagatgcaggcgtgcacgaacccgacgcagaag
gacaagctcgagacggacctcaagacgcagatcaaaaagctgcagcgtctgcgagaccaa
atcaagacctgggttgccagcaatgacatcaaggacaagacccagctgctcgagtaccgt
cgcctgatcgaaacgcaaatggaaaagtttaaagcgtgcgagaaggagatgaagaccaag
gcgttctccaaggagggcctcatcgccgcaatgcgactcgaccccgcggaaaaggccaag
cacgaagccagctcctggctcacccagatgctcgacgagcttactcgccaggtcgagctg
gccgaggccgaaatcgagacactcggcaacgccaaacggaaacacaaaggcgcggcgagc
gaacggcaaaccaccttggaagcgctcaacgaccggcgtaaatggcatcaaagtcgactc
gagattgtcctgcgcttgttggagaacggctcgttatcacccgaccaggtaaacgacctc
aaagacggtgtaacattcttcgtcgagtctaacacggaggaaggtttcgacgaggacgag
accatctacgacgacttgaatttggacgaggaagagaccgcattaggcttgggtggcgac
gacacgacaagcgacgacgacggggcgtctgacagtgaagacgttccgcatcacagaaca
ccgctgaaagacactcgcaagacgtctcacgacgactcggcatcgaagacagaatcggtc
aagctaagtccaacgttgaagaaggcaccggtagtattgcagttgaaacggccgggtggc
gagacacgtcaagcacctccccctgcaccgaatttcgctgcacagccgatggcgagcgcg
gttaaagcaaacattccggcggctcgtccaccagcactcccgcctatacgatacgcggca
gcagcagcggcagctgtaaatactcctgctgcgcaggcgagccaatcgcatccgcctgcg
acacccgctgtaccgcctacacccgcggcaacgaacggaacgtccaacgcaggctcgtac
acaactccctcactggaacagcaatctacggccaatacgtcttctccgagcttcacgcaa
ccctccttgtcgaacgcgagccccatactgtcgtccatcgcatcaccgcctgcggcatcg
tccaatccgctggcgcgctccacgccaccaccgcaagggtctaccaactcgtttgattct
cctacaagcagccatgcattgtcggaaaacccagtaccacaatcgacgtcctcgccacgc
cgttcgcaaggattgagcctggccgacgagtctcccgtagtaggaacggcacaatacgcg
tccgccgcacaagacttacaacagccgctacttaatacgtccaacggtggcgcgccttta
ccccctggccttgcagtcgctccaatgcaactgcaaccggtggctgctcagacaatggca
cctcctggcctcggcgcgaaggcacccatggtaccgcccggcatgggccaacaggcccca
gcgtacccgcccggggtcagcatcccgcaacaagctcccacagaagaatcgcccgccgcg
atgcagcaatacgtccagcgccccgcacccaacgtgccccccgcgctcgcggaccttgcg
caatcgttcgatggggcgaagcagagggccacccacggcccggacctcgagcaggttcac
aaggcgctcgaggtgggctgccacagcatcccgcagccgcaagatacggagaaacccaag
tactacgtgccgcgcaacccgtaccagacgccactgtactacccgcagcagccgatcccg
agcctcagcacggcgagcgtcttctcccagctcgacgtcgacacgctgttctacgtgttc
tatttcttgcccggcacgtaccagcagtacttggccgcgaaagagctcaagaagcagtcc
tggcgcttccacttgaagtacctgacctggttccagcgccactcggaaccgcaggctatt
acggacgagtatgagcagggcgtttacgtctacttcgactgggagggctcttggtgccag
cgcaagaagagcgacttccggttcgagtatcgttatctttccgaggactaa
DBGET
integrated database retrieval system
