Auricularia subglabra: AURDEDRAFT_162901
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Entry
AURDEDRAFT_162901 CDS
T03129
Name
(GenBank) Rcd1-domain-containing protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_162901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_162901
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURDEDRAFT_162901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-ProteinID:
EJD47927
JGI:
162901
LinkDB
All DBs
AA seq
341 aa
AA seq
DB search
MAVNLGVGLPVSHSPKPQYGHLGVHPLGILTPNPNFGGLYGSRALAQPSPPPLSSLPGAH
QIHYGHQAPEEARIHQLIVDLMEPALRETALLELSKKREQFDDLALVLWHSFGIMAILLQ
EIVAVYPLLSPPALTAHASNRVCNALALLQCVASHPETRQLFLNAHIPLFLYPFLNTTAK
TRPFEYLRLTSLGVIGALVKQNDNNTVIHFLLSTEIIPLCLRIMETGSELSKTVAIFIVQ
KILLDETGLTYICHTYERFYAVGTVLSNMVNQLVDTQAVRLLKHVVRCYLRLSDNARARE
ALRQCLPEALRDQTFASLLKGDMVTKRCLATLLQNLQADAN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaacctgggcgtcgggctccccgtctcgcactcgcccaagcctcaatatggg
cacctgggcgtgcacccgctgggcatcctgacgccgaacccgaacttcggcgggctgtac
ggctcgcgcgcgctggcgcagccgtcgccgccgccgctgtcgtcgctgccgggcgcgcac
cagatccactatgggcaccaggcacccgaagaggcgcgcattcaccagctcattgtcgac
ctcatggagccggccctgcgcgagaccgcgctgctcgagctcagcaagaagagggagcag
ttcgacgacctcgctcttgtcttgtggcactcgttcggcataatggcaatcctgttacag
gaaatcgtcgcggtgtacccgctgctgtctccgccggcgctcacggcacacgcaagcaac
cgggtatgcaacgccctcgcgctcctacagtgcgtagcctcgcaccccgagacacgccag
ctgttcctgaacgcccatatcccgctgttcctgtacccgttcctcaacacgacggcgaag
acacggccatttgagtacctccgcctgacctcgctcggcgtcatcggcgcgctcgtcaag
caaaacgacaacaacaccgtcatccacttcctgctctccacagagatcatcccgctctgt
ctccgcatcatggagaccggctctgagctcagcaagaccgtggccatcttcatcgtgcag
aagattctgctcgacgagaccgggctcacctatatctgccacacctatgagcgcttctac
gccgtcggcaccgtgctcagcaacatggttaaccagctcgtcgacacgcaggccgtgcgc
ctgctcaagcatgttgtgcgctgttatctccggctgagcgacaacgcacgcgcacgcgag
gcgctccgccagtgcctgcccgaggcgctgagagaccagacgtttgcctccctgctcaag
ggcgacatggtcacgaagcgctgcctggcgaccctgctccaaaatctccaggcggacgcc
aactag
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integrated database retrieval system
