Auricularia subglabra: AURDEDRAFT_162965
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Entry
AURDEDRAFT_162965 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
adl
Auricularia subglabra
Pathway
adl03030
DNA replication
adl03410
Base excision repair
adl03420
Nucleotide excision repair
adl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURDEDRAFT_162965
03410 Base excision repair
AURDEDRAFT_162965
03420 Nucleotide excision repair
AURDEDRAFT_162965
03430 Mismatch repair
AURDEDRAFT_162965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adl03032
]
AURDEDRAFT_162965
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_162965
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_162965
DNA replication proteins [BR:
adl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AURDEDRAFT_162965
DNA Replication Termination Factors
ELG1-RFC complex
AURDEDRAFT_162965
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AURDEDRAFT_162965
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AURDEDRAFT_162965
Check point factors
HRAD17(Rad24)-RFC complex
AURDEDRAFT_162965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
AAA_assoc_2
RCF1-5-like_lid
AAA_30
AAA_22
ResIII
DUF815
AAA_16
AAA_19
DEAD
AAA_5
RuvB_N
DNAX_ATPase_lid
AAA_24
AAA_28
AAA_3
AAA_7
ATPase_2
Methyltransf_31
Viral_helicase1
nSTAND3
SLFN-g3_helicase
bpMoxR
Bac_DnaA
AAA_33
MCM
Mg_chelatase
TIP49
NPHP3_N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
EJD47991
JGI:
162965
LinkDB
All DBs
AA seq
348 aa
AA seq
DB search
MDDAPAFPSAAKGKGKAVDPPKPAYDPENLPWVEKYRPVALSDVVSHDGITTTIENFIEK
NRLPHLLFYGPPGTGKTSTILAVARRIYGNDYKRQILELNASDDRGIDVVREQIKQFAET
RTLFRRSFKLIILDEADMMTQAAQSALRRIIEQYTKNVRFCIICNYVNKIAPAIQSRCTR
FRFSPLPIQDVERRVRHVIEAEDVKIEPDGLDALLKLSKGDMRRALNILQACHAAYDRTT
ETEIYNCTGSPHPADIQAIVQSMMTEEFTTAYHNISRIRVERGLALQDLITGAYDYVESI
ELPPQARVYLLDHLADTEHRLSTGGSEKLQFTALLGAFKIAVHISGKS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgctccggccttcccgtcggccgcaaagggcaaaggcaaggcggtcgacccg
cccaagcccgcctacgacccggagaacctaccttgggttgagaaatacaggccagtcgcg
ctcagtgacgttgtttcccatgacgggataaccacgaccattgagaacttcatcgaaaag
aacaggctaccacatctactattctatggccctccaggcacaggcaagacctctaccatc
ctcgctgtggcgcgccgcatttacggcaacgactacaaacgacaaatccttgagctcaac
gcatcggacgaccgcggtatcgacgtggtacgagagcagatcaagcaattcgctgaaacg
cgcacgctcttcaggcgaagctttaagctcattattctggacgaggcagatatgatgacg
caggccgcgcagtcggcgctgcggcgcatcatcgagcagtacacgaagaacgtgcggttc
tgcatcatctgcaactacgtgaacaagatcgcgccggcgatacagtcgcgctgcacgcgc
ttccgcttctcgccgctgcccatccaggacgttgagcgccgcgtgcggcacgtcatcgag
gccgaggacgtgaagattgagccggacggcctggacgcgctgctcaagctctcgaagggc
gacatgcgccgcgcgctcaacatcctgcaggcgtgccacgccgcgtacgaccgcacgacc
gagacggagatatacaactgcacgggcagcccgcaccccgccgacatccaggccatcgtc
cagtctatgatgaccgaggagttcaccacggcgtaccacaatatctcgcgcatacgcgtc
gagcgcgggctggcgctgcaggacctcatcaccggcgcatacgactacgtggaaagcatc
gagcttccgccgcaagcacgcgtctacctgctcgaccacctggcggacacagaacaccgc
ctgtcgacaggaggcagcgagaagctgcagtttaccgcgctcctgggagcattcaaaatc
gctgtccacatttccggcaagagttga
DBGET
integrated database retrieval system
