Auricularia subglabra: AURDEDRAFT_164769
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Entry
AURDEDRAFT_164769 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_164769
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AURDEDRAFT_164769
microRNA pathway
RISC loading complex
AURDEDRAFT_164769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
AAA_22
SLFN-g3_helicase
Cas3-like_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
EJD46112
JGI:
164769
LinkDB
All DBs
AA seq
1427 aa
AA seq
DB search
MSSQGQDAARPAQLEARRYQEEIFVAAQQGNIIAVLDTGSGKTFIAVQLIKWVTAQPCPE
RKVVVFLAPKRPLVMQQALFIQSQVPLNTQYYLGDMTVDDKKVELWDREQWRKEFTKRDV
LVMTPQILLDLLTHAHWQMSKISLLVFDEAHHAQGKHPYSQILKQFVSTLPVGKRPKIFG
MTASPTWDAKRAQKQLDALESTMNARIIAVKEHQVELSKHVSRPKELVYLYQSYDPSRRE
TYGLDDTEAAALEDAPLSPGDVPTVPGVWDVLSPLLEKDVPDFSKLKTRRDVLLDSLGPY
AAELFAHRYFTALAGKLLDAARKAAISATAKSLARVKRLEDLHARLAAFLSGFVPGEIPD
ALVSPKLRLLGDVLCENHDEHFKCVIFVEQKHIAMTLAELLPRLSELDWVSPAALIGHST
TGETDIGGMDSKQQAEVVKGFRASKYNVLLATSVAEEGLDFQACHLVIRFDGLQNLISYV
QSRGRARHANSTYVVLLPRDDPLALTKYEGMRDAEPLLREQYAAFTAAESVEPLDTDEPS
AADLALQQQYVVPSTGATLTYDTAIPLLELLCASAPSDQYGVLRPSYTVEELGEQAFRAA
VALPPALPLPRAALRFDSGDEPRKSKREARRAAAFAAVAELHSLGVFDDHLLPVNYKRDK
LGEDAYGRKSEDTSDVPEHMTVDVVLPWKPIRDQMWVHRYYVDGALAAGFVTGTRVPDVE
FSADGRRYSLGDALCVETEPGSLTLFAECTKTLLRLCGVFMRRCDSPLAFYLAFLGVDGR
PDLEAMRNFVQNPTSRDWESLAAASTEEVLVVNRIRLGHLYVLVNQHTGLTVDDKPVEVD
GTCREAGFASYMAYYQDLFEGQKYTLHLEAASPMFCCRQLPRLETSSYDISAVTGLAHVG
ERGKPVAMRMVPQSVCYRLCLSSITADAVRYLPQLTRRLCDVARATALDLPGIELNALIE
ATTLPPAMMGFDNQRLETLGDAFLKLGVSVYAFHAFPFKHEGQLTNVRIPSISNKSLLAR
ARAFNLQRYLSVEVSSRRKWSPRLTNGKVEMPRRSMQECVEALLGAAFASGGVPCALAVG
GKLGLCFGPPDKLWTERYVKPVPSPLRRPLLHELQQRLGHEFANETLLLEAVTHRSMQSS
ETPSYERLEFLGDALLDMAVMQYLFKKYPQATCGQLSWARQRAVCNSTLAWIAATRLHVH
ECLLQNHIELAKVIDAARQELIEMSAEQVIRDGWKMDMPKPPGDLVEAVFAAMFIDMGHD
YERAAARICAVIRDVLVLLSPDMPRDPSTELMLYIGRYGCMQVKYRKSASDPDGGRNDSM
TVVVHDIEVIRPVQAQSLLMAKAYAAAAAKTVLEDEDSPFHMLHLCTCMHVDRKKGKARD
DVDKPHVEQGNDETEVGFDTTVQQKLAEEGEPLVLVGPDPDPGELTE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccagggccaggacgctgctcggcctgcgcagctcgaggcgcggcggtatcag
gaagaaatcttcgtcgcggcgcagcagggtaacatcattgccgtgctcgacacaggctcg
ggcaagaccttcatcgccgtgcagctcatcaaatgggtcactgcgcagccctgcccggag
cgtaaagtcgtggtgttcctagcgccgaaacggcctctcgtgatgcagcaggcgcttttc
atccagtctcaggtccccctcaacacgcagtactatctgggcgacatgaccgtcgacgat
aagaaggtcgagctatgggaccgggaacagtggcgcaaggagttcacgaagcgcgacgtt
ctcgttatgacaccccaaatactgttggacctccttacgcacgctcactggcagatgtcg
aagatttcgctcctagttttcgacgaggcacaccatgcacagggcaaacatccttactcc
cagattctcaagcagtttgtatcaacgctcccagtcgggaagcgtccaaagattttcggc
atgacggcttcgccgacctgggacgcgaagcgcgctcagaaacagctggacgcgctggag
agcacgatgaacgcgaggatcattgccgtaaaggaacaccaggtcgagctctccaaacac
gtcagccgtcccaaggagctcgtttatctctaccagagctacgatccctccaggcgggaa
acatacgggctggatgataccgaggcagctgctttggaggatgccccactgagtcccggc
gacgtgcccacggtgcctggagtctgggacgtgctttctccgctcctggaaaaagacgtc
ccggacttctccaaattgaagacgcggcgagacgtgctgctcgattcccttggtccatat
gctgctgagctcttcgctcacagatactttactgcgctcgccggcaaactactggatgct
gcacgcaaggcggcgatctctgcgactgccaagtctcttgcgagggtgaagcgcctggaa
gacttgcacgcccggctcgcagcgttcctctccgggtttgtccccggagagatacctgac
gctctcgtctctccgaaactgcgcctgctaggcgacgtcttgtgcgagaaccacgacgaa
cactttaaatgtgtcatcttcgtcgagcagaaacacatcgccatgactctcgccgagctc
cttccccggctgtctgagctagactgggtctctcccgcggcgctcattggccactcgacc
acaggagagaccgacatcggcggcatggattcgaagcagcaggcggaggtcgtcaagggg
ttccgcgcgagcaagtataacgtactccttgccacatctgtggcggaggaaggactcgac
tttcaggcgtgccacctcgtcatccgcttcgacggtctgcagaacctgatctcgtacgtc
cagtcccgcggccgcgcgcgccacgcgaactcgacgtatgtcgtcctcctcccgcgggac
gatccgctggcgctcaccaagtacgagggtatgcgcgatgccgagcccttgcttcgcgag
cagtacgccgcgttcacagcagctgagtccgtcgagccactggacaccgacgagccctcc
gccgcggatctcgcgctgcagcaacaatacgtcgtgccctcgaccggcgcgaccctgacg
tacgacacggcaatccccctcctcgagctgctctgcgcctccgcgccctcagaccagtac
ggcgtgctccgcccttcgtataccgtcgaagaactcggggagcaggccttccgcgccgcc
gtggccctcccgcccgcactgccgctgccgcgcgctgcgcttcgcttcgattccggggac
gagcccaggaagtctaagcgcgaggcgcggcgcgcggccgcgttcgccgcggtcgcggag
ctccactcgctcggcgtgttcgacgaccatctgctgcccgtcaactacaagcgcgacaag
ctcggcgaggacgcgtacggacgcaaatcggaagacacctcggatgtgccggagcatatg
accgtcgacgtcgtcctgccatggaagccgattcgggatcagatgtgggtccacagatac
tatgtcgatggggctcttgcggctggctttgtcactggtactcgtgtgcccgacgttgag
ttttcggccgacggcaggcggtattctctgggagatgctctctgcgtggagaccgagccg
gggagtctgacgttatttgcagagtgcaccaaaactctgcttcggctctgtggcgtcttc
atgcgtcgttgtgattcgcccttagcgttctacctggcttttctgggtgtcgatgggcga
cctgacttggaggccatgcgcaatttcgtacagaacccgacgtctagggactgggagtcg
ctggcggctgcgtctaccgaggaagtgctggtcgttaaccgcatacgacttggtcatcta
tatgtcctggtgaaccagcacacgggcctcactgtggacgacaaacctgtagaagtcgat
ggcacgtgccgcgaagccgggtttgcctcatatatggcctactatcaagacctatttgaa
ggccagaagtacaccctgcacttggaagctgcatcgcccatgttttgctgtaggcagctg
ccgcgcctagagacttcctcgtatgacatatctgctgtgactgggctcgcacatgtcgga
gaacgcgggaagccggtagcaatgcgcatggtcccccagtcagtatgctaccgtctatgc
ttatcttccatcaccgcagacgccgtgcggtacctcccacaacttactcgccgcctatgc
gatgttgctcgcgcaactgccctggaccttcccggcatcgagctgaacgcgctgatcgag
gcaacgacactcccacctgcgatgatgggtttcgacaaccagcggttagagactctcgga
gatgcctttctgaagctcggcgtcagcgtctacgcgttccacgcgttcccattcaagcac
gaagggcaactcacaaacgtccgcataccgtcaatctcgaacaagtccctgcttgcgcgg
gcgcgggcattcaatctgcaacgatacctctccgtcgaagtcagctcgcgccgcaaatgg
tctccgcgccttacgaatggcaaggtcgaaatgccgaggcgcagcatgcaggaatgcgtg
gaagccttgctcggcgcggcgtttgcgagcggcggagtcccgtgcgcgctcgccgtaggg
ggcaaactcgggctttgctttggaccccccgacaagctgtggacagaacggtatgtgaag
cccgtcccgtctccgttgcgaagaccgcttctgcatgagctgcaacaacgactgggccat
gagttcgcaaacgagacgctgctgttggaggctgtcacgcacagaagtatgcagtcttcc
gaaacccccagctacgaacgcttggagttcctgggcgatgctcttttggacatggccgtc
atgcagtacctattcaagaaatacccgcaggcaacctgtggtcagctatcctgggcacgt
cagcgcgcggtctgcaactccacgctggcttggatagccgcgacgaggctgcacgtgcac
gagtgtctcctgcagaaccacatcgagcttgcgaaggtcatcgacgcggcgcggcaggag
ctgatcgagatgagcgccgagcaagtcattcgagacggctggaagatggacatgccgaag
ccgcccggagacctcgtcgaggctgtcttcgctgctatgttcatcgacatgggccatgat
tacgagcgcgctgccgcacgaatctgtgccgtcattcgggacgtacttgtgctgctcagc
ccggacatgccgcgcgacccgtcgacggagcttatgctgtacatcgggcggtatggatgc
atgcaagtcaaatacaggaaatctgcaagtgaccccgacggaggccgaaatgacagcatg
acggtggtcgtgcacgacatcgaagtcattcggcctgtccaggcgcagtcgctactcatg
gcgaaggcatatgcggctgcagctgccaaaacagtgctagaggacgaagactcgccgttc
catatgctccatctgtgcacttgcatgcacgtggaccgcaagaagggcaaagcgcgcgac
gatgtcgacaaacctcacgtagagcagggtaacgatgagacggaagtcggattcgacact
actgtccaacaaaagctcgcggaggagggcgagccgctcgtgcttgttggtcccgatccc
gaccccggagagctcacagaataa
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