Auricularia subglabra: AURDEDRAFT_167424
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Entry
AURDEDRAFT_167424 CDS
T03129
Name
(GenBank) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
adl
Auricularia subglabra
Pathway
adl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURDEDRAFT_167424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_167424
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AURDEDRAFT_167424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Lact-deh-memb
Mre11_DNA_bind
ARD
Motif
Other DBs
NCBI-ProteinID:
EJD43340
JGI:
167424
LinkDB
All DBs
AA seq
967 aa
AA seq
DB search
MMYTEESAEPKKTADFGGQSAPCDQAESAFCTFFHKLVQSDDTIRLFDRGEYYTVHGKDA
DFVALHVFRTTQVVKVLGKGMRKLNSVVLRPVLAKSFLREALTARQMRIEIWGIEDKKAN
KWALQRQASPGNLQDVEDLLFVNEDMSSAPIVMAVKLSSKGETKNVGVAFADASNREIGV
AEFVDNDLFSNTESLLIQLGVKECLLQSDEKKKEAADDEKKKDMDLAKLAQILERCNIVH
TARKAADFTGRNIEDDLRRLLKEDTTVAALPELDLKLAMQATAALTAYLALVSDDTNHGR
YALRRHDLAQYMRLDASGVRALGLFPAPQDQTLGGQRGKNTTLFGLLNKTRTGQGARLLA
RWLKQPLVNLHEIKKRQDLVEVFAEDGDARQTIQMEFLKAMPDFHRIGKRFQKKVAGLQD
VVRVYQAVQKLPPLIDNLEEMQGKLTQHQSDLVQSFFVQPLKASLHTNNHTLLEKYGEMV
ETTIDLEELDRSPNNYIIRSEHDEQLAKLATTIRRVRDGLDKEHAKAGRDLGLELDKKLH
LEKNDKYGYVFRVSKLDTKHIEGKRAYIQLATQKTGTFFRTQALADLATEFAEAAESYKA
KQAQLVKEIVEVAASYTEVLLALDDVIATMDVILSFAHVAMTAPTAYVKPTVLEMGTGNV
QLKEARHPCMEVQDEISFIPNDVEMIRGVSEFQIITGPNMGGKSTYIRQIGVIALMAQVG
SFVPCESATVPIFDSILARVGAGDSQLKGVSTFMAEMLETATILKSATQNSLVIIDELGR
GTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALDHQLPHVKNLHVVAHVAPRGTE
SKHDRDITLLYKVQPGICDQSFGIHVAELANFPESVLARRKADELEDFSGPAQEAFSQDV
IDAGTRLMQEMLSTWLAQHPGTATQGDDGDVVMEDATADIDALKQCYEQYRLELEANPWC
RSVLAGL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagaagaatccgcggagccaaagaagacggcggactttggaggccagtct
gcgccctgcgaccaggctgagtctgccttctgcacgtttttccacaagctcgtccagagc
gacgatacaatccggctattcgatcgcggggaatattacaccgtccacggcaaggatgcc
gacttcgtcgcattgcacgtctttcgcacgactcaggtcgtcaaagtgcttggcaaaggc
atgcggaagctcaactccgtcgttctgcggcccgtgctcgcaaagagcttcctccgcgaa
gccttgacagcccgccagatgcgcatcgaaatatggggcattgaagacaagaaggcgaac
aaatgggctcttcaacgacaggcgtctcctggcaatctacaggacgtggaggacctgctc
ttcgtcaacgaagacatgtcctcggcgcccattgtcatggccgtaaagttatcgtccaag
ggagagaccaagaacgtcggcgtcgccttcgcagatgcgtccaaccgcgagattggcgtc
gccgagttcgtcgacaacgacctcttctccaacaccgagtccctgctgatccagctgggc
gtgaaagaatgtttgctgcaatcggacgagaagaaaaaggaggcagcggacgacgagaag
aagaaagatatggacctcgccaagttggcacagattctcgaacggtgcaatattgtgcat
actgcacgcaaagcagccgacttcaccggccgcaacatcgaggacgacctccgccgtctg
ctcaaggaggacaccaccgtcgccgccctcccggagctcgacctgaagctcgcgatgcaa
gccacggcggcgctgacggcgtacctcgccctcgtctcggacgacacaaaccacggacgg
tatgctctgcgccggcacgacctcgcgcagtacatgcgcctcgacgcgtcgggcgtgcgc
gcgctcggcctcttccccgcgccgcaggaccagacacttggagggcagcgcggcaagaac
accacgctcttcggcctgctcaacaagacgcgcacggggcagggcgcgcggctgctggcg
cggtggctcaagcagccgctggtgaacttgcacgaaatcaagaaacggcaggacctcgtc
gaggtcttcgcggaggatggtgacgcacgacagacgatccagatggagtttttgaaggcc
atgcccgacttccatcggattggcaagcggttccagaagaaggtcgcgggactgcaggac
gtagtccgtgtctaccaggccgtgcagaagttacctcccctcattgacaatctcgaggag
atgcagggcaaactgacccagcaccagtcagaccttgtccaatcgttctttgtgcaaccc
ctcaaggccagcctgcacaccaataaccacacactgctcgaaaagtacggcgagatggtc
gagacgacgatcgacctggaggagctcgaccgctcgccgaacaactacatcatccggtcc
gagcacgacgagcagctggcgaagctggcgacgacgatccggcgcgtgcgcgacgggctg
gacaaggagcacgcgaaggccgggcgcgacctgggcctcgagctcgacaagaagctacac
ctcgagaagaacgacaagtacggctacgtcttccgcgtgagcaagctcgacacgaagcac
atcgagggcaagcgcgcctacatccagctcgcgacgcagaagaccggcacgttcttccgc
acccaggccctcgcggacctcgccaccgagtttgccgaggccgcggagagctacaaggcc
aagcaggcgcagctcgtcaaggagattgtcgaggtcgccgccagctataccgaagtgctg
ctcgcgctcgacgatgtgattgcgaccatggacgtcatactcagctttgcgcatgtcgcg
atgactgcccccacggcgtacgtcaagccgaccgtgctcgagatgggcaccggcaacgtg
cagctcaaggaggcgcgccacccgtgcatggaggtccaggacgagatcagcttcatcccc
aacgacgtcgagatgattcgtggcgtcagcgagttccagatcatcactggacccaacatg
ggcggcaagtcgacctacatccgccagattggtgtaattgcgctcatggcgcaggtcggg
agctttgtgccgtgcgagagcgcgacggttcccatcttcgactcaatcctcgcgcgcgtg
ggcgcgggcgacagccagctgaagggcgtgtcgacgtttatggccgagatgctcgagacg
gcgacgatcctcaagtccgcgacgcagaactcgctcgtcatcatcgacgagctcggccgc
gggacatcgacgtacgacggcttcgggctcgcttgggccatctctgaacatattgcctcg
caaatcagggcgttttgtctgttcgcgacgcacttccacgagctgaccgcgctcgaccac
caactgccgcacgtcaagaacttgcacgtcgtcgcgcacgttgcgccccgcgggacggaa
tccaagcatgaccgcgacatcaccctgctgtacaaggtccagcctggtatctgtgaccag
agcttcggtatccacgtcgccgagctggccaacttcccggaaagcgtcctggccagacgc
aaggcggatgagctggaagacttcagcgggcctgcacaggaagcattctcgcaggacgtt
atcgacgccggcacacggcttatgcaggaaatgttgtcaacgtggctcgcgcagcacccg
ggcaccgcgacgcaaggcgacgacggtgatgttgtcatggaagatgccacggccgacatc
gacgcgctgaagcagtgctatgagcaatatcgcttggagctggaagccaacccgtggtgc
cgttctgtgctggctgggctatga
DBGET
integrated database retrieval system