Auricularia subglabra: AURDEDRAFT_177170
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Entry
AURDEDRAFT_177170 CDS
T03129
Name
(GenBank) PIN domain-like protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_177170
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
AURDEDRAFT_177170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
GEN1_C
XPG_N
Motif
Other DBs
NCBI-ProteinID:
EJD33749
JGI:
177170
UniProt:
J0D4R5
LinkDB
All DBs
AA seq
574 aa
AA seq
DB search
MGVKDLWSILQPAAEKLPLAQMAVQAFEANTSRYRGYTVGIDISIWIGHMKVFNKIPQCG
PTAGIQMLLFRCAHLLELPLLPLFVFDGNERPTDKRGKEQQYKERGIEFDAKKVLDAYGF
AWAQARGEAEAELAYLNALGVIDAVWTDDGDAFLFGAMTIIRNPSAKLSSNIHANVFTSG
KHDANRVQVFKIADLLNNDEIQLNRAGLILIALLRGGDYHKGIDGVGMTIAHGLARCGFG
DSLAAVMQSQRSQDVDSFTSSVLEWRAGVVHELRTNSSGQLGTRHPKLAADFPQDFPDID
IYNAYANPVVTSAGEIEIDWYRMPDITKLAETCEHYFSWGSQTEILERFRSIVWPGAVCR
ALRQHTLEEDGMGDHLQPGLPQLGNLVAQIHRERRHYSTGGLRELRVEIAPAQLAAAARR
GTHYLRIPSANYTHGKVHIPPDEPLQIWLPAALVRAALPELVRAFDKAKAREQPRTGKKR
AARQSTSDSSASDHETAPRKAARREASPSPSRRPRPTDQSSAASSLSRHVKSTIIILSGS
EDDQPNLAVRARPVASAARRQDDADVIVISSSDE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcaaggacctctggagcatattgcagcctgccgctgaaaagctgccgctggcg
cagatggcggtgcaagccttcgaagcaaacacctctcgctaccgcggatacaccgtggga
atcgacatcagcatctggatcggccatatgaaggtattcaacaaaatacctcaatgcggg
ccgaccgctggcattcaaatgctcctcttccgctgtgcacatctcctagagctcccgctt
cttcctctcttcgtcttcgacggcaacgaacgacccacagacaagcgcgggaaggaacaa
cagtacaaagagcgggggattgaattcgatgcaaagaaggtccttgacgcatacgggttt
gcatgggctcaggcccgaggagaggcagaggccgagctagcatatctcaatgctctggga
gtaattgatgccgtttggacagacgacggcgacgcgttcctgtttggggcgatgacaatc
atccgcaatccaagcgcgaaactttcttcgaacatacatgccaatgtgttcaccagtggg
aaacacgacgcaaatcgggtacaagtgttcaagattgctgacctgctcaacaacgacgag
atccaactgaaccgcgctggactcattctcatcgcccttcttcgtggcggggattatcac
aagggaattgacggcgtgggcatgacgattgcccatggcctcgcgcgctgtggctttggc
gatagcctcgccgcggtcatgcagtctcagcgatcccaggacgtcgattcgttcactagt
tccgttctagagtggcgtgcaggcgtagtgcacgaactgcgcacgaattccagtggtcaa
ctcggtacgcggcaccccaagctcgcagccgactttccgcaggacttccctgacatcgat
atctacaacgcgtacgccaatccggttgtcaccagtgccggggagatagaaatcgactgg
taccgcatgcccgacatcacgaaactcgccgagacctgcgagcactacttctcgtggggt
tcccagactgagatcctggagcgcttccgctccatcgtctggcctggggctgtttgccgc
gcgttgcggcaacacactctcgaggaggatggcatgggagatcacctccagccgggtttg
ccacagcttggtaacctggtcgcgcagatccatcgcgaacgccggcattactcgacgggc
ggactgcgcgagctcagggtcgagatcgccccagcacagctcgcggctgccgcacggaga
ggtactcattatcttcgcatcccgtcagcgaattatacgcacggcaaggtacacattccg
ccggacgagccactgcagatctggctcccagccgcgctcgtccgtgccgccctgcccgag
cttgtgcgcgccttcgacaaagccaaagcgcgcgagcagcccagaacgggaaagaagcga
gcggctcgccagagcacatcggacagctctgcttcggaccacgagactgcaccccgaaag
gctgctcgcagggaagcctctccatcaccaagtcgccggccacgacccactgatcaatcg
agtgcggcttcgagcttgagtcgtcacgtcaagagtaccatcatcatcctctcaggcagc
gaggacgatcagccaaatctagcagtgcgcgcgcgacctgtagcaagcgcggcgcgccgt
caagatgatgcggacgtcatcgtcatctcgagcagcgacgagtag
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