Auricularia subglabra: AURDEDRAFT_178812
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Entry
AURDEDRAFT_178812 CDS
T03129
Name
(GenBank) RecF/RecN/SMC protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
adl
Auricularia subglabra
Pathway
adl04111
Cell cycle - yeast
adl04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
AURDEDRAFT_178812
04113 Meiosis - yeast
AURDEDRAFT_178812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_178812
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
adl00535
]
AURDEDRAFT_178812
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
AURDEDRAFT_178812
Meiosis-specific proteins
Cohesin complex and associated proteins
AURDEDRAFT_178812
Proteoglycans [BR:
adl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
AURDEDRAFT_178812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
CCDC39
CC_Bre1
ABC_tran
ENOX1
CENP-F_leu_zip
LRIM1_dimer
AAA_29
FKBP15
FtsK_SpoIIIE
DUF87
Motif
Other DBs
NCBI-ProteinID:
EJD54937
JGI:
178812
LinkDB
All DBs
AA seq
1209 aa
AA seq
DB search
MVYIKTITIHGFKSYRDQMDLDPFSPRHNVVLGRNGSGKSNFFAAIRFVLSDAYTSMARE
ERASLLHEGVSTAQTLSAYVEIVFDNADGRFPTGGNEVTLRRTIGLKKDEYSLDKRSASR
ADVMNLLESAGFSRSNPYYIVPQGRITALTNAKDHERLQLLKEVAGTKVYEAKRLESLKI
MEDTDAKRVKIGESLTYIEERLADLEEEKAELAEFQKKDKERRCLEYALYQRELSDVTEA
LDEIEDERRGEVDGATKKRRLYAEREARIAELEKETREGRQRLTVLAAERTSLRLELDDL
TKARTELRCTLADLETSAASSSAQRSALQDELKAIEKKVKQAERELLNLEPKWARVRERE
EQLRGQVETATARRDALNARKGRASQFKSARDRDAYLQGEIKSIEAFIGAQENHSVTLET
QAANLLAKAEQEDKKAEDALRRIEDRNKRMGEIHKEMGDVREQIATLSEERKELWREETR
LSQGVSHTQDELRSAERSLAGMMDKDTGSGLRAVDRIAKQLGFSSDQVFGPLYKLFEIPD
RKYATAVELTAGNSLFHVVVDTDTTAQRVLEVMLRERTGRVTFMPLNRLKPKPQNFPTGG
DAVPLIEKLQFDESVSKAMQQVFGRTAVCRDLAVAAAYVRSHGLNTITLDGDKVDRKGAL
TGGFHDVRRSRIDAIRNVRTWGERFAQEETRLKEVRDRAVVLDQQVTAHSGRLQVLQQQL
ARLQSSGDGLRDEGTWARAESERARDGARKAQAERAALKAEVDALRAKIEAYQAEMKAPM
ERGLSGDEEAALGRLVVDVETGREELVKVGRESAELGAKRELLEIELNESLRRRRDELRA
KVDALGTGAGTSDEEGGGEDLESRRRELRTLDGSVAELQRKLKDMESEVEQLTAEVQRLT
GELETAQAEQTEDARGMARAQKHADRYLAKRAMLLGRRDEVNASIRDLGVLPEEAFEKYT
GEKMDRLVKKLHAVNEGLKKFAHVNKKAFEQYGSFTKQRDVLIARREELDKAAVSIEELI
DTLDQRKDEAIDRTFKQVAKNFEEVFEQLVPAGRGRLIIQRRVDNDVDREDEDEDTQQSS
VENYTGVSIKVSFNSKVDEGLRIQQLSGGQKSLVALATVFAIQKCDPAPFYLFDEIDANL
DAQYRTAVARMIQSLAGSAQFIATTFRPEMLETADKFYGVLFDNQKVSSIRTITREEARE
FVEQEAMAQ
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatatcaagaccatcacgatccatgggttcaaatcctaccgcgaccagatggac
ctggacccgttcagcccgcggcacaacgtcgtgctcggccgcaacggctccggcaagtcc
aacttcttcgccgccatccggttcgtgctctcggacgcgtacacgtccatggcgcgcgag
gagcgcgcgagcctgctgcacgagggcgtcagcacggcccagacgcttagcgcgtacgtc
gagatcgtgttcgacaacgccgacggccgcttccccaccggcggcaacgaggtcacgctg
cgccgcaccatcggcctcaagaaggacgagtactcgctcgacaagcgctccgcatcgcgc
gccgacgtcatgaacctgctcgagtccgccggcttctcgcgctcgaacccgtactacatc
gtcccccagggccgcatcactgccctcaccaacgccaaggaccacgagcgcctccaactg
ctcaaggaggttgccggtaccaaggtctacgaggcgaaacgcctcgagagcctgaagatt
atggaggacacggacgccaaacgcgtcaagatcggcgaatcgctcacttacatcgaggag
cgtctcgcggacctcgaggaggagaaggccgagctcgccgagttccagaagaaggacaag
gagcgccgctgcctcgagtatgcgctttaccagcgcgagctcagcgacgtcacggaggcg
ttggacgagatcgaagacgaacggagaggcgaagtcgacggcgcaacaaagaaacgccgt
ctctatgctgagcgcgaggctcgtatcgccgagctggagaaggagacgcgcgagggcagg
cagcgcctcaccgttctcgcggccgagcgcacctcgttacgtcttgaactcgacgacttg
accaaggcccgaacggagctccgctgcacattggcagatttggagacgtcggcagcatca
tcgagcgcccagcgctctgcgctccaggacgaattgaaggcgatcgagaagaaggtcaag
caggccgagcgcgagctgctgaacctcgaacccaaatgggcccgcgttcgcgagcgcgag
gaacagctgcgcggccaggtcgagacggccactgcgcgccgcgatgcgctcaatgcgcgc
aaaggtcgcgcgagccagttcaagtccgcccgtgatcgtgacgcgtacctgcagggcgag
attaagagcatcgaagcgttcatcggcgcgcaagagaaccactctgtcacgctcgagacg
caagctgcgaacctgctcgcaaaggccgagcaggaggacaagaaggccgaggatgcgctg
aggcgtatcgaggaccgcaacaagcgtatgggcgagatccacaaggagatgggcgatgtc
agggagcagattgccacgctgagtgaggagcgcaaggaactgtggcgcgaggagactcgc
ctttcacagggcgtctcgcatacgcaggacgagctcaggagcgcggagaggagtcttgcg
gggatgatggacaaggacacgggctcgggcctgcgcgcagtggaccggattgcgaaacag
ttgggcttctcgtccgaccaggttttcggcccgttgtacaagctgttcgagatccctgac
aggaaatacgccacggccgtcgagctcaccgcgggaaacagtttgttccatgtcgtcgtc
gacacagacacgacggcccagcgtgtgctcgaggtcatgctgcgcgagcgcacaggccgc
gtgacgttcatgccgctcaaccgtctcaagcccaagccgcagaacttccccaccggcggc
gacgcagtgccgctcattgagaagctgcaatttgacgaaagcgttagcaaggctatgcag
caggtcttcggccgcaccgccgtctgccgtgaccttgccgtcgctgcggcgtacgtgcgc
tcccacgggctcaacaccatcacgctcgacggtgacaaggtcgatcgcaagggcgcgctg
accggcggtttccacgacgtgcggcgaagcaggatcgacgccattcgcaacgttcggacg
tggggcgagcggttcgcgcaggaggagacgcgcctcaaggaggtgcgcgaccgcgctgtt
gtgctggatcagcaggttaccgcgcactcgggtcggctgcaggtgttgcagcagcagcta
gcgcgcctgcagtcgtccggcgacggcctgcgggacgaggggacgtgggcacgcgcggaa
tccgagcgcgcacgggatggcgcgcggaaggcgcaagcagagcgcgccgcgctgaaggct
gaggtggacgcgctccgagcgaagatcgaggcgtatcaggcggagatgaaggcgcccatg
gagcgcgggctcagcggagacgaggaggccgcgcttggacggctagtcgtggatgttgag
acgggacgagaggagctcgtcaaggtcggacgagagagcgcggagctcggcgcgaaacgc
gagcttcttgagatcgagctcaacgagagcctacgtcggcggcgcgacgagttacgtgcc
aaggtcgatgcgctcggtaccggcgccgggacctctgacgaggaaggcggcggcgaggac
ttggagagccgtcgcagagagctacgcacgcttgacggcagtgttgctgagctgcaacga
aagctcaaagatatggagtccgaggtcgagcagctgacagccgaggtccagcggctgact
ggagagctggagacagcgcaggccgagcagactgaggacgcgcgcggcatggctcgcgcg
cagaagcacgctgatcgctacctcgccaagcgcgcgatgttgctggggcgcagagacgag
gtcaacgcgtccattcgcgacctgggcgttctcccggaagaggcgttcgagaaatataca
ggcgagaagatggaccggctcgtgaagaagctccatgcggtgaacgagggtctcaagaag
tttgcgcacgtcaacaagaaggcgttcgagcagtacggctcgttcaccaagcaacgcgac
gtgcttattgcacgccgcgaggagttggacaaggccgcagtcagcatcgaggagctcatc
gacacacttgaccagcgcaaagatgaggcgatcgacaggacgttcaagcaggtcgcgaag
aacttcgaggaggtcttcgagcagctcgtacctgccggacgcggacgccttatcatccag
cgcagggtggacaatgatgtggaccgcgaggatgaggatgaagacacgcagcagagcagt
gttgagaattataccggtgtatccatcaaggtctcgttcaactcgaaggtggatgaaggt
ttgcgtatccagcagctttctggcgggcaaaagtcgctcgtggcccttgcaacggttttt
gccatccagaaatgcgaccctgctccattctacttgttcgacgagatagacgcgaacttg
gacgctcagtatcgtactgcggtggcacgcatgattcaaagtctggccgggagcgctcag
ttcattgcgacgacgttccgtcccgaaatgctcgaaacggcggacaagttctacggtgtg
ctctttgataatcaaaaggtcagctctatcagaacgatcacccgcgaagaggcgcgcgag
ttcgttgagcaagaggctatggcgcagtag
DBGET
integrated database retrieval system
