Auricularia subglabra: AURDEDRAFT_179853
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Entry
AURDEDRAFT_179853 CDS
T03129
Name
(GenBank) DNA binding protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
adl
Auricularia subglabra
Pathway
adl03430
Mismatch repair
adl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURDEDRAFT_179853
03460 Fanconi anemia pathway
AURDEDRAFT_179853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_179853
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
AURDEDRAFT_179853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
EJD54784
JGI:
179853
LinkDB
All DBs
AA seq
693 aa
AA seq
DB search
MSDEDESYAPNAPKPIHRLDEALIIHRPSSALKELLENALDAGSTAIQLIVKDGGLKLLQ
LRDNGCGIRREDLPILAERFTTSKLSQFDDLRSLETYGFRGEALASISFVAQLSVVTKTK
AESCAWKACYANGALVPQKAGQTAEPKPCAGTDGTIITVENLFYNTPVRLAALRNPSDEY
GRLLDVMTKYAVHKPSVSFTCRKSGASQPDLHTPGSPSTRARDNIHKLYGASVSSALIPL
EANEEGFDDSSMAWHYDALCSNASYAGKSLKLILFINGRLVDSQPFRRAIESVYAPILAK
GSHPFVYLSLGISPECLDVNVHPTKREVRFLHEDDVVERFTIDLAAKLAEQAQSRPFAFN
TQKTQSRLQDDMLVDEEEDEQGSDMDEEPLPPSTQEPRRVYSQHKVRTSNKDRSLDSMLP
AASSDSAAVRTESGGPGQTTAPIAEASTTLLSILNLRKAVKEESHSKLQDILCDHTYVGL
VDARRALSLVQHGTRLYLLNHAIISEELFYQLGLRQFSAYPRVALNPAPPLRRIIRIGLD
VELKQRPSKLSAQDLEDKIYKVLMKRREMLDAHFGIRISADGELQTLPMLLPGYVPNMTK
LPLFAMRLGPQVDWSDEEQCFRTLLRELATFYSLAPAMASKDKSSDKDLAWQVQHLILAR
CRTDVFDPPAGLLDHAVVEVANLPALYRVFERC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaggacgagtcctacgcgccgaacgcgcccaagcctattcatagactggat
gaggcccttatcattcacaggccttcgtctgccctgaaggagcttctcgaaaatgccctg
gacgcaggctctacagcaattcagctcattgtcaaagacggcgggctgaagctgctccag
cttcgtgacaacggctgcggcatacgccgtgaagacttgcccatattggctgaacggttt
actacgtccaagctgtcccagttcgacgacctgcgctcgcttgagacctatggctttcga
ggcgaggcgctcgcgagcatctcctttgtcgcccagctctccgtcgtgaccaagaccaag
gctgagtcatgcgcgtggaaagcgtgctatgcgaatggcgcgctggtgccacagaaagcc
gggcagacagcagaacccaagccatgcgcaggcactgacggcacgatcatcacggtcgag
aatttattctacaacacacccgtgcgcctggcggctcttcgcaatccgtccgacgagtat
ggaaggctgctcgacgtcatgaccaagtatgctgttcataaaccctcagtctcgttcacc
tgccgcaagtcaggcgcttcccaaccggacctgcacacccctggaagcccgagcacccga
gcacgggacaacatccacaagctttatggagcttccgtgtccagcgcactgataccactt
gaggcaaacgaagaggggttcgatgacagcagcatggcctggcactacgatgcactgtgc
tcgaacgcaagctatgctggcaagagcctcaagctcattctttttatcaacggccgcctc
gtggactcgcagccgttcagacgtgcaatagagtccgtgtacgcgcccattctcgcgaag
ggttcgcatccctttgtctatctaagcctgggcatctcgccggaatgcctcgacgtgaac
gtgcacccgacaaagcgggaggttcgtttcctgcatgaggacgatgttgtggagcgcttc
accatcgacttggccgcaaagctcgcagaacaagcgcagtcccggccgttcgcattcaat
acacagaagacgcagtctaggttgcaagatgacatgctcgtggatgaagaggaggacgag
cagggctccgacatggacgaggagccactgcctccttcgacccaggagccgcggcgggtt
tactctcagcacaaagtgcgcacctccaacaaggaccgcagcctggactcgatgctgccc
gccgcctcgtcggactcggcagctgtgaggacggaatcgggcgggccgggacagacgact
gcacccatcgccgaggcatccacgacgctactatctattcttaatctgcgcaaggcggtg
aaggaggaatcacattcgaagctgcaggacatcttgtgcgaccacacctacgtcggcctc
gtggacgcgcggcgcgcgctgtcgctcgtgcagcatggcacgcggttgtacctcctgaac
catgctatcatcagcgaagagctgttctatcagctggggctccgccaattcagtgcatat
cctcgcgtcgctctgaatccggcgcctccgctgcgccgcatcatccgcattggactcgac
gtcgaactcaaacagcgaccgtcgaaattatcggcgcaagatctcgaagataagatttat
aaggtcctgatgaagcgtcgtgaaatgctcgacgcccatttcgggattcgtattagcgca
gacggagaactgcagacgctaccgatgctcctgccgggctatgttccgaacatgacgaag
ctaccacttttcgcgatgaggctcggtccccaggttgattggtcggacgaggaacaatgt
ttcagaacactcctacgcgagctggcaacgttttacagtctcgccccagcaatggcctcc
aaggataaaagctcggacaaggacctggcgtggcaagtgcagcatctgatcctcgcccgg
tgtcgaacggatgtgttcgaccctcccgcaggtctcctggaccacgccgtcgtcgaagtg
gctaacctgcccgcactgtaccgggtcttcgaacgttgctga
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