Auricularia subglabra: AURDEDRAFT_182634
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Entry
AURDEDRAFT_182634 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_182634
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AURDEDRAFT_182634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UAA
Motif
Other DBs
NCBI-ProteinID:
EJD50269
JGI:
182634
LinkDB
All DBs
AA seq
1931 aa
AA seq
DB search
MVTDADSPMEPPRKRFKHQSYKSAIREVHLPSAVQSTQLDEDLAENETHFQNALDNIFAI
SSSFSPAMAHSARSSKISTPMSTSRSTLRIELTRSASHRKCASSSVQIYLRTTLKPKFNE
LVDTLTSIIPRPQLSPRALTAVLSALASVFRLLQPDESMLTHAHTALLNALRKCSPEVQS
AGAEVWGAVLRRAKGPARDAVVAMTLAPLIDSDETTAGFVGAHAFVAACEVMTSWSSIAR
PLIDWSWSGAPSFSLELCGTVAALGWIGWSAIGLPAFTKRVPSLFAADADPDTARLATRV
LAELCANALAPAADDATFWDAVRGHVDHRLGGWTLSEDNVVELSAMLKLTPVLSRVEAKL
DVIIERLLDGDINPDAGWVLGRCFEALSHTKDVDVEKWTPRVLERWTVDEHAMSGFVALV
QATPSVSVTLPLETALPALRSHKRALRFAALRLSAPDANAAVRHMLAAEECTLDVAGSRG
RTVRITKLPALLGTVDNAKLGIAWLLGQLKVNLRPVWDPATKALAELAGRCGEDVWEAVW
EELDRDEDMDVDPRPADDDGEDEEDGVVKEAERTWRCPAAANVERAVRRWRADGSSARRE
VLKAQRPTVRLDGANYTTQLLRTLALVPALPEKHSRLLVPKFLALAEANMKGKLAPYLAL
FSKFGNPKALYRTSELHAIYLGLLAHPDRAIQRDALACVQSYKAPAIARLSDSLGGLLDE
TKWRDEMVGLTGAAADAPLDADAEDVLVRVCYGLMTERRAGKERRAAALTLVGALGERAM
GVLVALMLSPFGGSDDGLPGEKQQLGFLAMLGDVLSALGTSTMVYWSRLLDATLACLGAA
QRTLDSNDSDDNESDNDDTKDGGTRAVRLGGLKRFADFFRVPSDFDFAPYVARAFTCAIS
PRLPAFDRENTQAPSALLQMFVAWSGEPRTIRFLVDCDSVVLPKTFALLAAPSVKPPVVA
RVLDVADRILALSDEDTAIAEAVLLPHVGALLDNLQVLPHVGALLDNLAVLVARSTAAGK
GALGDLVQRQISILSRIAGHLLSGLFSMLRMRAARSAAAAAFAKLCGDQDEVATLVSEMN
AFSVKRIEEPDFERRFNAFKTLNDGLHAQLSARQWLPVLHNLLYFVQDTDELSLRNNAAY
GLRRFVDRVAADEAGVDIMLAFSRVVYPAIKRALRSAAELVRAEVLGVLAHGVEKCDNMP
SLVEMRGLLAGGDEEANFFNNIAHIQGHRRSRAMRRLVEYIDTGAVCSATLSQVFVPLVS
HPIYNSGTTDHRLVNEAITTTGTIAKHLSWPAYFSLVQQYLRGIKEPKEKVPVKPLVRAL
VSILDNFHFPMDASVAAGSADAPVATEDVGEDDEPQPVEQWKADSRIMDAVTAKLLPSLL
NILENREETEDGLRIPVCVGIVRIALHLPEQQRQPQVSRLLTVIAQIFRSKSQDTRDLTR
ETLCKIIVMLGPDYLAVAMKQLRGALLRGPHLHILAFVTHSILVHITSNATEQFATIDDS
VADIAHVAAEVIFGQSGKDLQSEDFKTKLKEVKGSTSRGMDCFALVSKCISSVKVSTLLL
PVRNIMEETESAKVMFQVDDVLRRVASGLNANPQLKPTDLLVMCHTLISQNARFLRETST
PSKKQGKIHPDVAVQVKRTLDAPTNHYINNSHRFIALGLDVFVTAARRSKFVLHDPDTLS
RLEPMVNVIGNTLYSNNANVLTLGLKAAAAVIKYPLKNVNKAMPALTRQMFDVVKQAGST
ESEVAQTALKTLAVLLRDAKSDSFKVKEVDLTFLLDILGPDLEEHERQATVFAVLRSTPL
HDRAYHKYGRGNWEEALFYLHFLAMPAFAFMARELYAQISAANRSRRIVIGNLDGSVRVG
RPLAFVPLPRIAIPSMYIPLALNVATSLVCVSGVHRLASSLTVTIILVVRKAVSLLITVI
LLGRGDGGAWL
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggtcacggacgcggactcgccaatggaaccgccgcgcaagcggttcaagcaccagtcg
tacaaaagcgccatccgcgaagtgcacctgccgtcggccgtccagagcacccagctcgac
gaggacctcgcggaaaacgagacgcacttccagaacgcgctcgacaacatcttcgcgatc
tcctcgagcttctcgccggcgatggcgcacagcgcgcgctcgtcgaagatctcgacgccc
atgagcacgagtcggtccaccttgcgcatcgagctcacgcgcagcgcgtcgcacaggaag
tgcgcgagctcgtccgtccagatctacctgcgcacgacgctcaagcccaagttcaatgag
ctagtcgacacattgacctccattatccctcgtccacagctctcgccgcgcgcgttgacg
gccgtgctctctgcactcgccagcgtcttccgcctgctgcagcccgacgagtccatgctc
acccacgcccacaccgccctactcaacgccttacggaagtgctcgcccgaggtccagagc
gccggcgccgaagtctggggcgccgtcctgcgtcgcgcaaaaggcccagcacgcgacgcc
gtcgtcgcaatgaccctcgcgccgctcatcgacagtgacgagaccaccgcgggctttgtc
ggcgctcacgcgttcgtggcagcatgcgaggtcatgacatcctggtcctccatcgcccgc
ccgctcatcgactggtcctggtccggcgccccttcgttctcgctcgagctatgcggcacc
gtcgccgcgctcggctggatcggctggtctgccatcggccttcccgcctttacgaaacgc
gttccgtccctcttcgccgctgacgcggacccggacacggcgcgccttgcgacgcgcgtc
ttggctgagctctgtgccaacgcgcttgcgcctgctgctgacgacgcgaccttctgggac
gccgttcgcggccacgtcgaccaccggctgggcggctggacgttgtccgaagacaacgtc
gtcgagttgagcgcgatgctgaagctcacgcccgtcctctcgcgcgtcgaggccaagctc
gacgtcatcatcgaacgcctcctcgacggcgatatcaaccccgacgccggatgggtacta
ggccgctgcttcgaggcgttatcgcacacgaaagacgtggacgtcgagaaatggacacca
cgcgtactcgagcgctggacggtagacgaacacgccatgtcaggcttcgttgcgctcgtc
caggccacgccctcagtctctgtgaccctcccgctcgagactgccctccccgcccttcgc
tcgcacaagcgcgcgctgcggttcgccgcgctccgcctctccgcaccggacgcgaacgcc
gcggtgcggcacatgctcgcggccgaggaatgcacgctcgacgtcgccggctcccgcggg
cgcacggtgcgcatcacgaagttaccggcgctgctggggaccgtagataacgccaagctc
gggatcgcctggctgctcggccagctgaaggtcaacctccgtccggtgtgggaccccgcg
accaaggcgctcgctgagcttgcgggccggtgtggcgaggatgtgtgggaggctgtctgg
gaagagctggatcgcgacgaggatatggacgtcgacccgcgccctgccgacgacgacgga
gaggacgaggaggacggagtggtcaaagaggccgaacggacgtggcgatgtcccgcggcc
gcgaatgttgagcgcgccgtgcggcggtggcgcgcggatggaagctcagcacgacgcgag
gtgctgaaggctcaacgcccgacagtccgactcgacggcgcgaattacacgacgcagctt
ctgcgcacgctcgcgctcgtgcccgcgctgccggagaaacactcgcggctgctcgtcccg
aagttcctcgcgctcgccgaggcaaacatgaagggcaagctcgccccgtacctcgcgctc
ttctcgaaattcggcaacccgaaggcgctgtaccgcacgtccgagttacacgcaatctac
ctcggtctactcgcacacccggatcgggcgattcagcgtgacgcgctggcctgcgtgcag
agctacaaggcgccggcgatcgcgcgcctttctgacagcctcggggggctgctggacgag
acgaaatggcgcgacgagatggttggcctgacaggtgctgcggcggacgcgccgcttgat
gccgatgcggaggacgtgctcgtgcgcgtgtgctacggactgatgaccgagcgccgcgcg
ggcaaggagcggcgcgccgcggcgctgactctagtcggcgcactgggcgagcgcgcgatg
ggcgtcctcgtcgcgctaatgctctcgccctttggcgggagcgatgacgggctccctggc
gagaaacagcagctcggtttcctcgccatgttgggcgacgttttgagcgcgctcgggacc
agcacgatggtgtactggtcgcggctccttgacgcgaccctcgcgtgtctcggcgcggca
cagcgcacgctcgatagcaacgacagcgatgacaacgaatccgataacgacgacacgaaa
gacggcggcacgcgcgcagtgcgtctcgggggtctcaagcggttcgcggatttcttccgc
gtaccctccgacttcgactttgcgccctacgttgcgcgggcattcacctgtgcgatctcg
ccgcgcctgccggcgttcgaccgcgagaacacgcaagcgccgtccgcgctgcttcagatg
ttcgtcgcctggtcaggcgagcctcggactatacgctttctcgtcgattgcgatagcgtc
gtgctgccgaagaccttcgcgctgctcgcggcaccaagcgtcaagccgcccgtcgtcgcg
cgcgtgctcgacgttgcggaccgcatcctcgcgctgtcagacgaggacacagcgattgca
gaggccgtgctcctcccgcacgtcggcgcgctgctcgataacctgcaggtcctcccgcac
gtcggcgcgctgctcgataacctggcggtgcttgttgctcgtagtactgcagcaggcaag
ggtgccttgggcgaccttgtgcagcggcaaatctccatcctcagtcgcatcgcgggccat
ctcctctcagggctgttctcgatgctacgtatgcgtgctgcacggagcgcggcggctgca
gccttcgcaaaactgtgtggcgaccaggacgaggtggcgaccctcgtaagcgagatgaac
gcgttctccgtcaaacgcatcgaggagccagacttcgagcgccggttcaacgctttcaag
accctcaacgacggccttcacgcgcagctcagtgcgcgccagtggctgcccgtgctgcac
aaccttctctacttcgtccaggacacagacgagctctcgctgcgtaacaacgccgcgtac
ggtctgcgccgcttcgtcgaccgtgtcgccgcagatgaagctggtgtcgatatcatgctt
gctttctcgcgcgtcgtctaccccgcgataaaacgcgctctgcgttccgccgcggagctc
gtgcgcgctgaggttctgggcgtgcttgcgcacggggtggagaaatgcgacaatatgccc
tcgctcgtcgagatgcgaggtcttcttgcaggcggagatgaggaggccaacttcttcaac
aacatcgcacacattcaggggcatcggcgctcgcgcgcgatgcgccgcctcgtggagtac
atcgacacaggcgccgtttgcagcgcgacgctttcgcaggtgttcgtgccgctcgtgagc
cacccgatctacaactcgggcacgacggaccatcggctcgtcaacgaggccattacgacg
accggcactattgcaaaacacctgagttggcccgcatacttctccctggtccaacagtac
ctccggggtatcaaggaacccaaagagaaagtgccggtcaagccgctggtgcgagctctg
gtctcaatcctcgacaacttccacttccccatggacgcctcggtcgctgcaggctccgct
gatgctcctgtagccactgaggatgtcggagaagacgacgaaccgcagcctgtcgagcaa
tggaaggccgactcgcgcatcatggacgctgtgaccgcgaagcttctgcccagtctcctc
aatatcctggagaaccgcgaggagacggaggacgggctgcgcatacccgtttgtgtcggc
atcgttcgcattgcgctgcaccttccggagcagcaacgacagcctcaagtctcgcgctta
ttgacggtcatcgcccagatcttccggagcaagtcgcaggatacacgcgaccttacgcgc
gagacgctctgcaagattatcgtcatgctcggtcccgactacctggcggtggcgatgaag
cagttgcggggcgcgctcttgcgcggaccgcacttgcacatcctcgccttcgtcacccat
tctatcctcgttcacatcacgtcgaacgcaaccgagcagttcgcgacgatcgacgactcc
gtggcggacattgcccacgtcgcagcagaggtcatcttcggtcagtcgggcaaggacctg
cagtccgaggatttcaagaccaagctcaaggaggtcaagggctcgacctcgcgcggcatg
gactgtttcgctctggtttccaagtgcatttcttccgtcaaggtttcgacgctgttgttg
ccggtgcgcaacatcatggaagagaccgagtcggcgaaggtcatgttccaagtcgacgac
gttcttcggcgcgttgcgagcggtctcaatgccaacccgcagctaaagccaaccgacctg
ctcgtcatgtgtcacacgctcatcagtcagaacgccaggtttcttcgcgaaacttcgacc
ccatccaagaagcagggcaagatccatcccgacgtcgctgtgcaggtgaagcggacgctg
gacgcgccgacgaaccattacatcaacaattcacatcggttcattgcactcggtctcgac
gtatttgtcaccgcagcgcgaaggagcaagttcgttctccacgacccggacacactttct
cgcctcgaacccatggtcaacgtcatcggcaacacgctgtactccaacaacgccaatgtt
cttaccctcggactgaaggcagcagcggctgtcatcaagtatccgctgaagaacgtgaac
aaggcgatgcccgccctcactcggcagatgttcgatgtcgtcaagcaggctgggagcacg
gagtcagaagttgcgcaaacggcgctcaagaccttggctgtcctgttgcgcgatgcaaaa
tcggactcgttcaaggtcaaggaagtcgacctgacgttcttgctggacatcctcggcccg
gacctcgaggaacacgagcgacaagcgaccgtcttcgccgtcctgcgctctactcctctc
catgacagggcgtaccacaaatacggccgcggcaactgggaggaggcgctcttctacctg
cacttcctcgcgatgcccgctttcgcgttcatggcgcgcgagctgtacgcccagatatcc
gccgcgaaccgcagccgcaggatcgtaatcggaaacctcgacggctcagtgcgtgtaggc
aggcccctggcgttcgtcccgctcccgaggattgcgatcccgagcatgtacatcccgctc
gcgctcaacgtggcgacgtcgctggtgtgcgtatcgggcgtgcatcggctcgcgtcgtct
ttgactgtcacaatcatcctcgtcgtgcgcaaggccgtttcgctgttgatcaccgtcatc
cttctgggacggggcgacggcggtgcctggctatag
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