KEGG   Auricularia subglabra: AURDEDRAFT_185880
Entry
AURDEDRAFT_185880 CDS       T03129                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
adl  Auricularia subglabra
Pathway
adl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AURDEDRAFT_185880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:adl03009]
    AURDEDRAFT_185880
Ribosome biogenesis [BR:adl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    AURDEDRAFT_185880
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40 EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st PQQ_2 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 DUF6923
Other DBs
NCBI-ProteinID: EJD42695
JGI: 185880
LinkDB
AA seq 713 aa
MSSKKTPKPPKSRPQSTFNKAVPEGAARHRHLSAFSPSGNEFALVSLALDKHRLRVFDVS
TSRIVAEHTFDDARVTCLAWSSLPDEDEPSPAKKRKKHTDGESSTLNPPAAYAIALGLSS
GAVCLFSAAHGRVLRTLSHATSSSAVTAVSGADGTVWASSNDGTLRSWNPTSGESLGSWK
RQRPSCRLSVRPDSDELLECANDARLITFDDDDGPEDLCRLSGHASDIVDVAWGQSPSTR
LLTCADGDRVVHLWDIPDSGEGALLVTMPLDSDVLSVSISGEQVLLAVTASGRAYLAPLP
TKLSKKKTATIEPQSTISIVVKGLGEGNIAAASFRSEQAGRICVVRIAGGVRPVFETIRY
TNDDGEYVADVVVKQSDVGLATTQDSAMHANKRYREHTTLAVQSGVAPGADAAADSAVLD
GHLDAELAELSLGQRMGLDRHADLDEDDIVQEGLERTLEGRRLHAHKIPKASGSLARTLV
QALHAGDSQLLDTVLRYGGDIRIVQATVRRLPPQLAVPFLTSVTERMARRKQDAAAASAQ
RGLSLLNWVRAVLVVHGAHLLTMPDLVARLAALHATLTTRATMQDRLLALSGRLELVLAQ
AALRGEPVSGEAKPKKDDPNKPETRYVEGESDEDPIEEDEDGSDAGSEEVVELGEDDDDD
DDDLPSGSGEEDDEDDEEDEDESGSDTGARRANGLVDDEAEEEWDDESESDEE
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgtccagcaaaaagacccccaagccgcccaagtcgcgtccgcagtcgacgttcaacaag
gccgtgcccgagggtgctgccaggcataggcatctgtccgcgttctcgcccagtggcaat
gaatttgcgctggtctcgctcgcgctggacaagcaccggctgcgtgtcttcgacgtctcg
acatcgcgtatcgtggccgagcacacgtttgacgacgcccgggtcacgtgtcttgcgtgg
tcgtcgctgcccgacgaggacgagccgtcgccggcgaagaaacggaaaaaacacaccgac
ggcgagagcagcacgctcaacccgcccgccgcctatgccatcgccctgggcctctcctcc
ggcgccgtatgcctcttttctgccgcacatggccgcgttctgcgcactctctcgcatgcg
acgagctcgtcggccgttacagccgtctccggtgcagacggcaccgtatgggcctccagc
aacgacggcacgctacgatcgtggaatccgacctcgggagagtctctgggcagctggaaa
cgccaacggccttcgtgtcggctcagcgtccggcccgacagtgacgagctcctggaatgc
gcaaacgacgcaagactcatcacgttcgacgacgacgacggccccgaagacctctgcaga
ctcagtggccacgcgtcggacatcgtcgacgtcgcctggggacaatctccgagcactcgt
cttctcacctgcgccgacggagaccgcgtcgtgcacctatgggatatcccggattctggt
gaaggcgcgctgctcgtgacaatgcctctcgactcggacgtgctctcagtcagcatttcc
ggcgagcaggttctgctggctgtcacggcctctggcagggcataccttgccccgctgccg
acaaaactgtcgaagaaaaaaaccgcgacaatcgagcctcagtcgacgatatcgattgtt
gtcaaggggctcggcgagggcaacattgctgctgcttccttccgctctgagcaagccggt
cgaatatgcgtcgtccgtatcgctggtggcgtgcggccagtattcgaaaccatccgctat
actaatgacgacggcgaatacgtcgcagacgtcgtggtcaagcaatcggatgttggcctc
gcaacgacccaggactctgcgatgcacgcaaacaagcgttaccgcgagcatacgaccctt
gcggttcaatccggcgtcgcgcctggtgcagacgcggctgccgactcggcggttctggat
ggccacctcgatgccgagctcgcagaattgtctttgggtcaacgcatgggcctcgacagg
catgcggacctggacgaggacgacatcgtgcaagagggcctggagcgcacgctcgagggc
cggcggctgcacgcgcacaaaatccccaaagcgtccgggtcgctcgcgcggacgctcgtg
caagccctgcatgccggagactcgcagctgctcgacactgtactgcgctacggcggtgac
atccgcatcgtccaggcgaccgtgcgccgcctgccgccgcagctggccgtgccgttcttg
acctccgtcacggagcgcatggcgcggcgcaagcaggatgccgctgccgcgagcgcacag
cgtgggctgtctctgctcaactgggtcagggccgtgcttgttgtgcatggcgctcatttg
ctcacgatgcctgacttggtggcacggttggccgcgctccatgcgaccttgacgacccgc
gcgactatgcaggatcgcctgttggccctcagtggacggctcgagcttgtgttggcgcag
gccgcgctccgcggcgagccagtgtctggggaagctaagccgaaaaaggacgatccgaac
aaaccggagacgcgctatgtcgagggggaaagtgacgaagacccgattgaagaggatgag
gacggcagcgatgccggtagcgaggaagtcgtcgagcttggtgaggatgacgacgatgac
gacgatgacttgccgagtggcagtggcgaagaggatgatgaagatgacgaggaagatgag
gacgaaagcggtagcgacaccggggcgcgtcgagcaaacggccttgtcgatgatgaggcg
gaggaggaatgggatgacgagagcgagagcgatgaggaatga

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