Auricularia subglabra: AURDEDRAFT_185880
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Entry
AURDEDRAFT_185880 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
adl
Auricularia subglabra
Pathway
adl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AURDEDRAFT_185880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_185880
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AURDEDRAFT_185880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
PQQ_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
DUF6923
Motif
Other DBs
NCBI-ProteinID:
EJD42695
JGI:
185880
LinkDB
All DBs
AA seq
713 aa
AA seq
DB search
MSSKKTPKPPKSRPQSTFNKAVPEGAARHRHLSAFSPSGNEFALVSLALDKHRLRVFDVS
TSRIVAEHTFDDARVTCLAWSSLPDEDEPSPAKKRKKHTDGESSTLNPPAAYAIALGLSS
GAVCLFSAAHGRVLRTLSHATSSSAVTAVSGADGTVWASSNDGTLRSWNPTSGESLGSWK
RQRPSCRLSVRPDSDELLECANDARLITFDDDDGPEDLCRLSGHASDIVDVAWGQSPSTR
LLTCADGDRVVHLWDIPDSGEGALLVTMPLDSDVLSVSISGEQVLLAVTASGRAYLAPLP
TKLSKKKTATIEPQSTISIVVKGLGEGNIAAASFRSEQAGRICVVRIAGGVRPVFETIRY
TNDDGEYVADVVVKQSDVGLATTQDSAMHANKRYREHTTLAVQSGVAPGADAAADSAVLD
GHLDAELAELSLGQRMGLDRHADLDEDDIVQEGLERTLEGRRLHAHKIPKASGSLARTLV
QALHAGDSQLLDTVLRYGGDIRIVQATVRRLPPQLAVPFLTSVTERMARRKQDAAAASAQ
RGLSLLNWVRAVLVVHGAHLLTMPDLVARLAALHATLTTRATMQDRLLALSGRLELVLAQ
AALRGEPVSGEAKPKKDDPNKPETRYVEGESDEDPIEEDEDGSDAGSEEVVELGEDDDDD
DDDLPSGSGEEDDEDDEEDEDESGSDTGARRANGLVDDEAEEEWDDESESDEE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaaaagacccccaagccgcccaagtcgcgtccgcagtcgacgttcaacaag
gccgtgcccgagggtgctgccaggcataggcatctgtccgcgttctcgcccagtggcaat
gaatttgcgctggtctcgctcgcgctggacaagcaccggctgcgtgtcttcgacgtctcg
acatcgcgtatcgtggccgagcacacgtttgacgacgcccgggtcacgtgtcttgcgtgg
tcgtcgctgcccgacgaggacgagccgtcgccggcgaagaaacggaaaaaacacaccgac
ggcgagagcagcacgctcaacccgcccgccgcctatgccatcgccctgggcctctcctcc
ggcgccgtatgcctcttttctgccgcacatggccgcgttctgcgcactctctcgcatgcg
acgagctcgtcggccgttacagccgtctccggtgcagacggcaccgtatgggcctccagc
aacgacggcacgctacgatcgtggaatccgacctcgggagagtctctgggcagctggaaa
cgccaacggccttcgtgtcggctcagcgtccggcccgacagtgacgagctcctggaatgc
gcaaacgacgcaagactcatcacgttcgacgacgacgacggccccgaagacctctgcaga
ctcagtggccacgcgtcggacatcgtcgacgtcgcctggggacaatctccgagcactcgt
cttctcacctgcgccgacggagaccgcgtcgtgcacctatgggatatcccggattctggt
gaaggcgcgctgctcgtgacaatgcctctcgactcggacgtgctctcagtcagcatttcc
ggcgagcaggttctgctggctgtcacggcctctggcagggcataccttgccccgctgccg
acaaaactgtcgaagaaaaaaaccgcgacaatcgagcctcagtcgacgatatcgattgtt
gtcaaggggctcggcgagggcaacattgctgctgcttccttccgctctgagcaagccggt
cgaatatgcgtcgtccgtatcgctggtggcgtgcggccagtattcgaaaccatccgctat
actaatgacgacggcgaatacgtcgcagacgtcgtggtcaagcaatcggatgttggcctc
gcaacgacccaggactctgcgatgcacgcaaacaagcgttaccgcgagcatacgaccctt
gcggttcaatccggcgtcgcgcctggtgcagacgcggctgccgactcggcggttctggat
ggccacctcgatgccgagctcgcagaattgtctttgggtcaacgcatgggcctcgacagg
catgcggacctggacgaggacgacatcgtgcaagagggcctggagcgcacgctcgagggc
cggcggctgcacgcgcacaaaatccccaaagcgtccgggtcgctcgcgcggacgctcgtg
caagccctgcatgccggagactcgcagctgctcgacactgtactgcgctacggcggtgac
atccgcatcgtccaggcgaccgtgcgccgcctgccgccgcagctggccgtgccgttcttg
acctccgtcacggagcgcatggcgcggcgcaagcaggatgccgctgccgcgagcgcacag
cgtgggctgtctctgctcaactgggtcagggccgtgcttgttgtgcatggcgctcatttg
ctcacgatgcctgacttggtggcacggttggccgcgctccatgcgaccttgacgacccgc
gcgactatgcaggatcgcctgttggccctcagtggacggctcgagcttgtgttggcgcag
gccgcgctccgcggcgagccagtgtctggggaagctaagccgaaaaaggacgatccgaac
aaaccggagacgcgctatgtcgagggggaaagtgacgaagacccgattgaagaggatgag
gacggcagcgatgccggtagcgaggaagtcgtcgagcttggtgaggatgacgacgatgac
gacgatgacttgccgagtggcagtggcgaagaggatgatgaagatgacgaggaagatgag
gacgaaagcggtagcgacaccggggcgcgtcgagcaaacggccttgtcgatgatgaggcg
gaggaggaatgggatgacgagagcgagagcgatgaggaatga
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