Auricularia subglabra: AURDEDRAFT_185887
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Entry
AURDEDRAFT_185887 CDS
T03129
Name
(GenBank) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
adl
Auricularia subglabra
Pathway
adl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AURDEDRAFT_185887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_185887
Enzymes [BR:
adl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AURDEDRAFT_185887
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
AURDEDRAFT_185887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
17kDa_Anti_2
Motif
Other DBs
NCBI-ProteinID:
EJD42702
JGI:
185887
LinkDB
All DBs
AA seq
1404 aa
AA seq
DB search
MKEVVSHAAPKVVTKIQFSLLNPQQIVQLSEFEVTHRDLYIPEDHVPAKNGPLDRRLGTV
EKNTTCETCGHPTQDCVGHYAYIKLMLPVFHVGYFRHTINILQQICKTCARVMLSESERR
TYLARFRRPGLENLQRLTLCKAVNTLCRKVIVCPYCASINGTVKKGGTLKIVHDKYRAKK
TADEMEKFKSTFKSAVEFQKDLGTYLSKAVIEELNPLKVLDLFKRISDEDCELLGMKPVH
GRPEHYLWQYISVPPVCIRPSVAQDGGSNEDDLTVKLAEIVFSNTLIKQGIQKGAPIQQL
MEQWEFLQISVAVYINSEMPGLQNQPNQRPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRT
VISPDPNLRIDEVAVPQRVAKILTYPERVTSSNLEKLRLAVRNGPDVHPGANYVVAASNG
FKKFLKFGNRDDVADKLRVGDVVERHVIDGDIILFNRQPSLHKLSIMCHRAKVRPWRTFR
LNECVCTPYNADFDGDEMNLHVPQTEEARAEASQLMWVVNNLVTPRNGEPVIAAIQDFIT
ASYLLCRKDRFYTRAQFTQICGYFGDALVHIELPPPVILKPARLWTGKQIFSCLLRPNKS
TNVLVNVETKCNQFEKPDPKHYPSWMTPENDLSLNDGWLVIVNSEIMSGTLDKATIGSGK
KKSVFGAIMKDYGPQEAALAMGRLAKLCARFLANFGFSIGINDVTPGPLLTGEKQRLVTE
AYEKCQKLIDQAKRGQLQNKPGCNTDQTLEALISDILSDVRGQVGKICMKELSRHNAPWT
MATCGSKGSVDNVAQMVACVGQQIIGGRRVPDGFQDRSLPHFEKKSKDPASKGFVSNSFY
TGLTATEFLLHAISGREGLVDTAVKTAETGYMQRRLMKALEDLTTQYDLSVRNSVGGVVQ
FYYGNDGLDPACMEAEDNPVEFVRAWKHAFATAAREGPGLLPYEIEELAKTTISSFGALA
DAEEDYLNTVEDFVRINLVEKLAAIRRRYGLLDGRDKPGARSKNRDWNAGAGEDVINAVN
NTLKVAKPQLLLFLQNCWSRYVQSKIEPGSNVGAIGAQSIGEPGTQMTLKSFHFAGLASM
NVTLGVPRIKEIINAAKTIATPIISCMLVDRQSEQSARSVKGRLEKTRLGDIASVIEEAW
APDYTYIGIIVDVLAIHRLQLELSLDDIKWAIVRAKKLKIKEGTVSVLPSKNRIRIYVEG
ETSYFRLRELRRALPDVIVKGVPSVQRAVIVKKDKEDRRGKKGEKELIVEGYGLQEVMIT
DGIIGTHTTSNHIIEVAKVLGIEAARATIVDQIGYTMREHGLTVDARHIMLLGDCMTTKG
EVLGITRFGVAKMKDSVLMLASFEKTTDHLFDAAAVGKNDSLTGVSEAIIMGNPSAKFGT
SLPALVTPAPTLSTPRPLLFESAL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtcgtgtcgcacgctgcgcccaaggtcgtgacgaaaatccagttcagcttg
ctgaacccacagcaaatcgtccagctctccgagttcgaggtcacgcacagggacctctac
atccctgaggaccatgtcccagctaagaacgggcctctagatcgccgcctgggcacggtc
gagaagaacacgacatgcgagacgtgcggacacccgacccaggactgcgtcggccattac
gcgtacatcaagctcatgctccctgtgttccacgttggctactttcgccatacgatcaac
atattgcagcaaatatgcaagacatgcgcccgtgtaatgctcagcgaaagcgaacgacga
acctatctcgcgcgattccgacggccagggctcgaaaacctgcagcgcctgacgctctgc
aaggcagtcaacactctctgtcgcaaggtcatcgtctgtccctattgcgcatctatcaac
ggcaccgtcaagaagggcggcacgctcaagatcgtgcacgacaagtatcgcgcgaagaag
acggcggacgagatggagaagttcaagtccaccttcaagagcgccgtcgagttccagaag
gacctcggcacataccttagcaaggctgtcatcgaggagctcaacccgctcaaggtcctg
gacttgttcaagcgcatctcagatgaggactgcgagttgcttggcatgaaacccgtacac
ggccgcccggagcactacctctggcagtacatatctgtgccgccagtttgcattcgcccc
tccgtcgcgcaggatggcggtagcaacgaggacgacctgaccgtcaagctcgccgaaatc
gtcttctccaatacgctgatcaagcaaggcatccagaagggcgcgccgatccagcaactc
atggagcaatgggaatttctccagatatccgtcgcggtctacatcaacagtgaaatgccc
ggcctgcaaaaccaacctaaccaacgccccatacgcggtttctgccaacgcctcaagggc
aagcagggtcggtttcgcggcaacctctccggcaagcgcgtcgacttctccgggcgcacg
gtcatctcgcccgaccccaacctgcgcatcgacgaggtcgccgtgccgcagcgtgttgcg
aagatcctcacgtaccccgagcgcgtgacgtccagcaacctcgagaagctgcgcctcgcc
gtgcgcaatggaccggacgtgcacccgggcgcgaactacgttgtcgctgctagcaatggg
ttcaagaagttcttgaagtttggtaaccgggacgacgtcgcggacaagttgcgtgtgggg
gacgttgttgagcgtcacgtcatcgatggagatatcattctgttcaaccgccagcctagt
ttgcacaagttgtctatcatgtgccatcgagcgaaagttcgtccatggcggacgttccga
ctcaacgagtgtgtctgcaccccgtacaatgctgacttcgacggcgacgagatgaatctg
cacgttccgcagacggaagaggcccgcgcagaagcctcgcagctcatgtgggtggtcaac
aacctcgtgacgccgcgtaacggcgagcccgtcatcgccgcaatccaggatttcattacg
gcgtcgtacctcctctgccgcaaggaccggttctacacacgcgcgcagttcacgcagatc
tgtggctatttcggcgacgcgctcgtgcacatcgagctcccgccgccggtaatcctcaag
cccgcgcggctctggacgggcaagcagatcttcagctgcctcctccggcccaacaagagc
acgaacgtgctggttaacgtcgagaccaagtgcaaccagttcgagaaaccggacccgaag
cactaccccagctggatgacccccgagaacgacctcagcctgaacgacggctggctcgtc
atcgtcaactcagagatcatgagtggcacgctcgacaaggccaccatcggtagcggcaag
aagaagtcagtgttcggtgcgatcatgaaggactatggtccacaggaggcagcgctcgca
atgggccgtctcgcgaaactctgcgcgcggttcctcgccaacttcgggttctccatcggc
atcaacgacgtcacgcccggtccattgctgaccggcgaaaagcagcgtctcgtcacagag
gcgtacgagaagtgccagaagctcatcgatcaggcgaagcgcggccagctgcagaacaag
ccgggatgtaatacagaccagacccttgaagccctgatatccgacatcctgtccgacgtg
cgtgggcaggtcggcaagatatgcatgaaagagctcagccggcacaacgctccgtggacg
atggctacttgtggttccaaaggttccgtcgacaacgtcgcgcagatggtggcctgtgtc
gggcagcagattatcggtggccgtcgcgtgcccgacggcttccaggaccgctcactcccg
catttcgagaagaagtcgaaggacccggcctcgaaaggtttcgtcagcaacagcttctac
accggcttgactgccacggagttcctcttgcacgccatctcgggtcgtgaaggtctggtc
gacacggctgtcaagaccgccgagactgggtacatgcagcgtcgactcatgaaggcgctc
gaggatctgacaacgcagtacgatctgtccgtgcgcaactcggtgggcggcgtcgtgcaa
ttctactacgggaacgacggtttggaccccgcgtgcatggaggcagaggacaatcctgtc
gaattcgtacgcgcgtggaagcacgcttttgctactgcagcacgcgaaggtcccggcctc
cttccgtatgagattgaggagctggcgaagactaccatcagcagcttcggagccctcgcg
gacgctgaggaagactacctcaacaccgtggaagatttcgtccgaatcaaccttgttgag
aaattggcggccattcgtaggcgatatggcctgctggacggacgtgacaagcccggcgcg
cgctccaagaaccgtgactggaatgcgggcgcgggagaggacgtgatcaacgcggtcaac
aacacgctgaaggtggcgaagccgcagctgctgctcttcctgcagaactgctggtcgcgc
tacgtgcagtccaagatcgagccggggtcgaacgtcggcgcgatcggcgcccagtccatc
ggcgagccgggcacgcagatgacgctcaagtcgttccattttgcggggctggcgtccatg
aacgttacgctcggcgtgccgcgtatcaaggagattatcaacgccgcgaagacgatcgcc
acgcccattatcagttgcatgctcgtcgaccgccagagcgagcagagcgcgcggagtgtc
aagggccggcttgagaagacgcgattgggagacattgcgtcggtcattgaggaggcttgg
gctccggactacacctacattggcattatcgtggatgttctcgcaattcaccggcttcag
ctggaactatccctcgacgacatcaaatgggctatcgtgagagcaaagaaactcaagatc
aaggaggggactgtcagcgttcttcctagcaagaatcgtattcgcatttatgtggagggc
gaaacgagctacttccgtctgcgtgaactgcggcgggcattgcccgacgtcattgtcaag
ggcgtgccgtccgtgcagcgcgctgtcatcgtcaagaaggataaagaggatagacgcggc
aagaagggcgagaaggagctcatagtcgagggctacggcctgcaggaggtcatgatcaca
gatggcatcattgggacgcataccacgtcgaaccatatcattgaggttgccaaggtcttg
ggtattgaagcagctcgcgccaccattgtcgaccagattgggtacacgatgagggagcac
ggtttgaccgtcgatgctcgtcacattatgttgctgggtgattgtatgacgacgaaggga
gaggttctgggcatcacgcgtttcggtgtcgcgaagatgaaggacagcgtgttgatgctc
gcctcgtttgaaaagacgacggaccatctattcgacgctgccgccgtcgggaaaaatgat
agccttactggtgtctctgaggctatcatcatgggtaacccctccgccaagttcggaaca
tccttgccggctcttgtgactcctgctcctacactgtccacgccgcggccgctgttgttc
gagtcggcgttatag
DBGET
integrated database retrieval system
