Auricularia subglabra: AURDEDRAFT_187491
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Entry
AURDEDRAFT_187491 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_187491
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
AURDEDRAFT_187491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_KIB1-4
NBCH_WD40
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-ProteinID:
EJD39202
JGI:
187491
LinkDB
All DBs
AA seq
898 aa
AA seq
DB search
MRFTKPAWVQHQNDDKRRTTICSVHVHPDGSRVATGGLDTKVRIWATKPILKPEAEESGR
PPKLLSTLGSHVGPVMTVRWSNSGKWLASGSDDSLVMIWDLDPNGGGKVWGSDDVNVEGW
KALKRLPGHESDVSDLAWSPKDRYLASVGLDNLVFIWCGYTLERLYRIEGHQGFVKGVCW
DPVGQYLATQSDDRTVKIWRTGDWKEVKTISKPFVDSPSSTWFRRLSWSPDGAHITASNA
MNAGAVFIATVIARETWQSDISLVGHENTVEAACYNPHIFLREPDKSVQTNNICSVVALG
AGDGSVSVWQTKNPRPLVVGKECFTHPVLDLSWSPDGMTLYAVSFDGTMAVFDFDPEELE
GIAPSSAQHTYLQKFDFAMPEAPQGALQYAAPVAAPQVVNQLVARKGGKNRNRVSLQQQQ
PNGVPSALTPNGTGPPQPQMPVTPTPVVPASHDPFSSAPLLMPGAMAPDMRYPSPSPLSR
SFNADDLPPPIEALDDRERKRRRRDSDIGGAAVGSAFGGAPAPAGARARTLGGDRPRANI
PARDLSVPAPPSRPRTPSGMRHDIRLSLPPLRNILQHAVEGLGELEALNSNDPTKPSEVA
LFTGSGRTVQWMDFLPSPALCLALAHDFGAVAMWDGSVNVYSHSGRKLMPSMLLVAPCAF
MSSKGSWLLALTSTGQIYLWNVVSQASAFTPHSILPFLSEDVCVVDALVRDNGVAVLSLS
SGVQIAFDRALQTWSKVAEPWWASGSDVVERSRAAARGPVSELERVVSNSNVMMKVDGTA
MAANKWWGPAMTLGHLETRIHAARILESAGEWRAAVLVYAKRIADEGFRAKAEEMAHELC
GPIYWKPGNAASKDWEPTVLGFEKREVLREVLGIFSKSKTLAKMAVEWQDLLKRMSAQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcaccaagccggcgtgggtgcagcaccaaaacgacgacaagcggcggacgacg
atatgcagcgtgcacgtccacccagacggctcgcgcgtcgcgaccggcggcctcgacacc
aaagtgcggatatgggcgacgaagcccatcctcaagcccgaggccgaggagtcagggcgg
ccgcccaagctgctgtctacgctgggctcgcacgtcgggcccgtgatgaccgtgcggtgg
tcgaattcgggcaagtggctagccagcggcagcgacgactcgctcgttatgatatgggac
cttgacccgaacggcgggggaaaggtctggggctcggacgatgtcaacgtcgaaggctgg
aaggcactcaaacgattaccaggccacgagagcgacgtgtctgatcttgcatggtctccc
aaggaccggtatcttgcctcggtcggcctcgacaaccttgtattcatatggtgtggttat
acgctcgagagattgtacagaatagaaggacaccaaggcttcgtcaagggcgtatgttgg
gatcctgtcggccagtacctcgcaactcaatcggacgaccgcactgtcaagatctggcgg
acgggcgactggaaggaggtcaagactatcagcaaaccgtttgtcgacagcccgagtagt
acctggttccgccgcctgagctggtcgccggacggcgcgcacattacggcgagcaacgcg
atgaacgctggcgctgtgttcattgcgacggtcatcgcgcgcgaaacctggcagagcgat
atctccctcgttggccacgagaacaccgtcgaggcagcctgttacaacccgcacatattc
ctccgcgagcccgacaaatcggtgcagaccaacaacatctgttcggttgtagcactcggc
gcaggcgatggctcagtctccgtttggcagacgaagaatccgcgcccgctcgtagtgggc
aaggaatgctttacacatcccgtgcttgacctcagttggagccctgacgggatgacgctc
tacgccgtttcattcgacggcacaatggccgtcttcgacttcgaccccgaggagctcgaa
ggcatcgcgccttcttccgcgcagcatacctacctccagaagttcgacttcgcgatgccg
gaggcgccgcagggcgcgctgcagtacgccgcgccggtcgccgcgccgcaggtcgtgaac
cagctcgtcgcgcgcaaggggggcaagaaccggaaccgcgtgtcgctccagcaacagcag
ccgaacggagttccctccgcgctgacgccgaatggcaccggccccccgcagccgcaaatg
cccgtgacgcccacgcctgttgtccccgcgtcgcacgatccgttctccagcgcgccgctg
ctcatgcccggcgcgatggcgcctgacatgcgttacccctcgccctcgccgctctcgcgc
tccttcaacgccgacgacctaccgccgcccatcgaggcgctggacgaccgcgagcgcaag
cggcgccggcgcgactcggacattggtggtgctgcggtagggtcggccttcggcggcgca
cctgcgcccgcgggcgcaagggcgcggacgctcggtggcgaccgcccgcgcgccaatatc
cccgcgcgtgacctgagcgtgcccgcgccgccgagccgcccgcgcacgccgtccggtatg
aggcacgacatccggctcagcttgccgccgctgcgcaatatcctgcagcacgccgtcgag
ggcctcggcgagctcgaagcgctcaactctaacgacccgacgaaaccgtccgaggtcgcg
ctcttcacgggctcggggcgaacggtgcagtggatggacttcctgccctccccggcgcta
tgtcttgccctcgcccacgacttcggcgccgtcgccatgtgggacggctccgtcaacgtg
tactctcattcaggcagaaagttaatgccttccatgttgcttgtggccccttgcgctttc
atgtcgtcgaaagggtcgtggttattagccttgacgtcgacgggacagatttatctctgg
aacgtcgtctcgcaggcctccgccttcacaccgcacagcatcctgccattcctcagcgag
gacgtgtgcgttgtagacgcgctcgtgcgcgacaacggcgtcgcggtgctctcgctctcg
tccggcgtccagatcgcgttcgaccgcgcgctgcagacgtggagcaaggtcgcggagccg
tggtgggcctcgggctcggacgtcgtcgagcgctcgcgcgcggcggcgcgcgggcccgtg
tccgagctcgagcgcgtcgtgtcgaacagcaacgtcatgatgaaggtcgatggcaccgcc
atggctgccaacaagtggtggggccccgcgatgacgctcggccacctcgagacgcgcatc
cacgccgcgcgcatcctcgagagcgccggcgagtggcgcgccgcggtgctcgtgtatgcg
aagcgcattgccgacgagggcttccgcgccaaggccgaggagatggcgcacgagctgtgc
gggccgatatattggaagccgggcaacgcggcgtccaaggattgggagccgactgtgctt
gggttcgagaagcgcgaggtgttgagggaggtgctgggtatattctcaaagagcaagacg
ctagcgaagatggccgtcgagtggcaagaccttttgaaacgaatgtccgcgcaatga
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integrated database retrieval system