Auricularia subglabra: AURDEDRAFT_188967
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Entry
AURDEDRAFT_188967 CDS
T03129
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adl03016
]
AURDEDRAFT_188967
Enzymes [BR:
adl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AURDEDRAFT_188967
Transfer RNA biogenesis [BR:
adl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURDEDRAFT_188967
Prokaryotic type
AURDEDRAFT_188967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
EBNA2_Core
Motif
Other DBs
NCBI-ProteinID:
EJD34606
JGI:
188967
UniProt:
J0CVY8
LinkDB
All DBs
AA seq
531 aa
AA seq
DB search
MNPTSLKRDRDMDADNNDSQDAHSDREPNKRIKLDVADDAEQASSSSKPAAREKGAKRGR
GRGRGRGRDNWKSRDWGPRTEPRAERAGDTEDGASSKQRLPKRKCALLLGFCGTGFNGMQ
RQARQLNARTIEGELFAALVKAGAISEDNADDPSKSQLQRSARTDSGVHAAGNVVSIKLI
TEVPGVPDLVAHINDLLPPSIRLWSIVRVQNSFSARTSCDSRKYTYVFPSHILLPPKPGS
PLHSHLKSSPGVSDAVVNHPFWAEVGAELSPEEERRRKQRWRVGPAALDAFRAALAEYHG
THNFHNFTVQKEFDDVTTSRFIKTTEVPAPLERDGIEWISVLFHGQSFMLHQRKMISAAL
LLARTGTPPSLMNELYGPPKVHIPKAPALGLLLEYPLFESYNTKIEATVHSSIESERREP
IDFAPLSARMDEFKEAKIYSEIRAREAELNIFEVWLRSIDNYSGDDFKYLGPSGAIPPEA
VYVRGVPRPNQFRDPRKDVPQSASGGDARALEESDEDEVAISKKDLAEMEG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccacgtcgctaaagcgcgaccgggacatggacgccgataacaacgacagccag
gacgcgcattcggaccgtgagccgaacaagcgtatcaagctcgacgtagcagacgatgcc
gagcaagcctcgtcgtcgtcgaagccggcggcgcgcgagaagggcgcgaaacgcggccgc
gggcgaggccggggccgtgggcgtgataattggaagtcccgtgactggggcccacgaaca
gagcccagggccgagcgtgcaggcgacaccgaagacggcgcatcatcgaaacaacggctt
ccgaagcgcaaatgcgccctgcttctgggattttgcggcacgggattcaacggcatgcag
cggcaagcaaggcaacttaatgctcgcacgatcgaaggcgaactgtttgccgcgctcgtc
aaagcaggcgccatttccgaggataacgcagacgatccatcgaagagccagcttcaacgt
tcagctcgcacagattctggtgttcacgcggcggggaacgttgtgtccataaaactcatt
acagaagtacctggggtgccggacttggtcgcacacatcaacgatctcctgccgccttca
atccgcctctggtcgattgtgcgcgtgcagaactctttcagcgctcggacgagttgcgat
agccggaaatacacatacgtttttccctcgcacatcctccttccgccaaaaccgggatct
ccccttcattcacacttgaagtcatctcccggcgtatcagacgccgtggtgaaccatccc
ttctgggcggaagttggtgccgaattgtcgccagaggaggaacggcgtcgaaaacaacgg
tggagggtgggccctgcggctctggacgccttcagggccgccttagccgagtatcatggc
acgcacaacttccataacttcactgtgcagaaggagttcgatgatgtgacgacgtctcgc
ttcatcaagaccacagaggttccagcgcccctggagcgagacggtatcgagtggatctcc
gtgctatttcacggtcagagtttcatgctgcaccagcgcaagatgatcagcgccgcactc
ctgcttgcccggacggggacgccgccatctctcatgaacgagctttacggccccccaaag
gtgcacatccccaaggcgcccgcgctcggcctgctcctcgaatacccgctgttcgagagc
tacaacaccaagatcgaagcgacggtgcacagcagcattgaatccgaacgccgcgagccg
atcgactttgcgccgctcagcgcgcggatggacgagttcaaggaggccaaaatctacagc
gagatccgcgcacgcgaggccgagctcaacatcttcgaggtttggctcagaagtatcgac
aactattctggcgacgacttcaaatacttgggaccaagcggggccatcccgccggaggcc
gtctacgtgcgtggcgtccctcgccccaatcagttccgcgaccctcgcaaggatgtcccg
caaagtgcctccgggggcgatgctcgagcgctcgaggaaagcgacgaagacgaggttgcc
atctcaaagaaggatctcgcggagatggaggggtaa
DBGET
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