KEGG   Auricularia subglabra: AURDEDRAFT_35539
Entry
AURDEDRAFT_35539  CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
adl  Auricularia subglabra
Pathway
adl03020  RNA polymerase
adl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AURDEDRAFT_35539
  09124 Replication and repair
   03420 Nucleotide excision repair
    AURDEDRAFT_35539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adl03021]
    AURDEDRAFT_35539
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_35539
Transcription machinery [BR:adl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     AURDEDRAFT_35539
  RNA polymerase III system
   RNA polymerase III
     AURDEDRAFT_35539
  RNA polymerase I system
   RNA polymerase I
     AURDEDRAFT_35539
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AURDEDRAFT_35539
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DUF7577 DUF7129 DUF7130 DZR_2 Zn_Ribbon_TF DmmA-like_C DZR MCM_OB Zn_ribbon_10 HypA zf_C2H2_LIN26-LIR3 zf_Tbcl_2 Cas12f1-like_TNB zf_Tbcl Zn_ribbon_8
Other DBs
NCBI-ProteinID: EJD52826
JGI: 35539
LinkDB
AA seq 53 aa
GGQNSGAGGYMPQRADMEYLCADCGAKNEIKPREPIRCRECGHRIMYKKRTKR
NT seq 159 nt   +upstreamnt  +downstreamnt
ggcggccagaattcgggcgcgggcggctacatgccccagcgcgcagacatggagtacctc
tgtgctgattgcggtgcgaaaaacgaaatcaagccgcgcgagcccatccgctgccgcgag
tgtggccatcgtatcatgtacaagaagcgcacgaaacga

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